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URL: https://bioconductor.org/packages/release/bioc/html/tximeta.html
Proper Citation: tximeta (RRID:SCR_028005)
Description: Software R package for reference sequence checksums for provenance identification in RNA-seq. Performs numerous annotation and metadata gathering tasks on behalf of users during the import of transcript counts and abundance from quantification tools such as salmon. Data are imported as SummarizedExperiment objects with associated GenomicRanges metadata. Correct metadata is added automatically via reference sequence digests, facilitating genomic analyses and assisting in computational reproducibility.
Synonyms: Tximeta
Resource Type: software toolkit, software resource
Defining Citation: PMID:32097405
Keywords: reference sequence checksums, provenance identification in RNA-seq, numerous annotation, metadata gathering,
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