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Waxholm Space Atlas of the Sprague Dawley Rat Brain (RRID:SCR_017124)
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Resource Information

URL: http://www.nitrc.org/projects/whs-sd-atlas/

Proper Citation: Waxholm Space Atlas of the Sprague Dawley Rat Brain (RRID:SCR_017124)

Description: Open access volumetric atlas of anatomical delineations of rat brain based on structural contrast in isotropic magnetic resonance and diffusion tensor images acquired ex vivo from 80 day old male Sprague Dawley rat at Duke Center for In Vivo Microscopy. Spatial reference is provided by Waxholm Space coordinate system. Location of bregma and lambda are identified as anchors towards stereotaxic space. Application areas include localization of signal in non structural images. Atlas, MRI and DTI volumes, and diffusion tensor data are shared in NIfTI format.

Abbreviations: WHS-SD-atlas

Synonyms: WHS SD rat atlas, WHS_SD_rat_atlas, WHS-SD-rat-atlas

Resource Type: waxholm atlas, data or information resource, atlas

Defining Citation: PMID:24726336, PMID:25585022

Keywords: volumetric, atlas, anatomical, delineation, rat, brain, structural, contrast, isotropic, MIR, DTI, male, Sprague Dawley, image

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This resource

is listed by

NeuroImaging Tools and Resources Collaboratory (NITRC)

is related to

ITK-SNAP

is related to

PMOD Software

is related to

Duke University; North Carolina; USA

has parent organization

University of Oslo; Oslo; Norway

works with

MeshView

works with

VisuAlign

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