URL: http://blanco.biomol.uci.edu/mpex/
Proper Citation: Membrane Protein Explorer (RRID:SCR_014077)
Description: Software which predicts topology and other features of membrane proteins through hydropathy plots based on thermodynamic and biological principles. This version of MPEx uses two types of hydropathy scales: Experiment-based whole-residue partitioning scales and experiment-based biological partitioning scales. The whole-residue partitioning scales predict the transmembrane (TM) segments of membrane proteins of known structure. The biological scale utilizes current knowledge of the code the Sec61 translocon to identify TM segments. MPEx is a Java program (not a Java applet) deployed using Java Web Start, which is part of the Java Runtime Environment.
Abbreviations: MPEx
Synonyms: Membrane Protein Explorer (MPEx)
Resource Type: software resource, data analysis software, data processing software, software application
Defining Citation: PMID:19785006
Keywords: membrane protein, hydropathy plot, topology, software, java, bio.tools
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