URL: http://ekhidna.biocenter.helsinki.fi/dali_server
Proper Citation: Dali Server (RRID:SCR_013433)
Description: Network service for comparing protein structures in 3D. You submit the coordinates of a query protein structure and Dali compares them against those in the Protein Data Bank (PDB). You receive an email notification when the search has finished. In favourable cases, comparing 3D structures may reveal biologically interesting similarities that are not detectable by comparing sequences. Requests can also be submitted by e-mail to dali-server at helsinki dot fi. The body of the e-mail message must contain atomic coordinates in PDB format. If you want to know the structural neighbours of a protein already in the Protein Data Bank (PDB), you can find them in the Dali Database. If you want to superimpose two particular structures, you can do it in the pairwise DaliLite server. Academic users may download the DaliLite program for local use.
Synonyms: Dali
Resource Type: software resource, analysis service resource, data analysis service, service resource, production service resource
Defining Citation: PMID:20457744
Keywords: Protein structure comparison server, protein structure, comparison server, bio.tools, FASEB list
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