URL: http://sourceforge.net/projects/ngopt/
Proper Citation: A5-miseq (RRID:SCR_012148)
Description: Software that produces high quality microbial genome assemblies on a laptop computer without any parameter tuning. A5-miseq does this by automating the process of adapter trimming, quality filtering, error correction, contig and scaffold generation, and detection of misassemblies. Unlike the original A5 pipeline, A5-miseq can use long reads from the Illumina MiSeq, use read pairing information during contig generation, and includes several improvements to read trimming.
Resource Type: software resource
Defining Citation: PMID:25338718
Keywords: standalone software, illumina, unix/linux, mac os x, bio.tools
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