URL: http://kmersvm.beerlab.org/
Proper Citation: kmer-SVM (RRID:SCR_010882)
Description: A webserver built on the Galaxy framework that enables the mining of sequence data for transcription factor binding sites. This tool suite was designed to aid in analysis of next-generation sequencing (NGS) data that uses a support vector machine (SVM) with kmer sequence features to identify predictive combinations of short transcription factor binding sites which determine the tissue specificity of the original NGS assay. While you may use datasets already available from Galaxy, you can upload your data using the ''Get Data'' Tool. The tool can upload data from a variety of locations.
Abbreviations: kmer-SVM
Resource Type: software resource, service resource, analysis service resource, data analysis service, production service resource
Defining Citation: PMID:23771147
Keywords: bio.tools
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Johns Hopkins University School of Medicine; Baltimore, Maryland; USA |
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