URL: http://llama.mshri.on.ca/funcassociate/
Proper Citation: FuncAssociate: The Gene Set Functionator (RRID:SCR_005768)
Description: A web-based tool that accepts as input a list of genes, and returns a list of GO attributes that are over- (or under-) represented among the genes in the input list. Only those over- (or under-) representations that are statistically significant, after correcting for multiple hypotheses testing, are reported. Currently 37 organisms are supported. In addition to the input list of genes, users may specify a) whether this list should be regarded as ordered or unordered; b) the universe of genes to be considered by FuncAssociate; c) whether to report over-, or under-represented attributes, or both; and d) the p-value cutoff. A new version of FuncAssociate supports a wider range of naming schemes for input genes, and uses more frequently updated GO associations. However, some features of the original version, such as sorting by LOD or the option to see the gene-attribute table, are not yet implemented. Platform: Online tool
Abbreviations: FuncAssociate
Resource Type: data analysis service, analysis service resource, production service resource, service resource
Defining Citation: PMID:19717575, PMID:14668247
Keywords: gene, gene ontology, statistical analysis, web service, bio.tools
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