URL: https://code.google.com/p/pepr-chip-seq/
Proper Citation: PePr (RRID:SCR_005759)
Description: A ChIP-Seq peak calling or differential binding analysis tool that is primarily designed for data with biological replicates. It uses a negative binomial distribution to model the read counts among the samples in the same group, and look for consistent differences between ChIP and control group or two ChIP groups run under different conditions.
Abbreviations: PePr
Synonyms: pepr-chip-seq, Peak Prioritization Pipeline, pepr-chip-seq: A ChIP-Seq analyzing program for biological replicates
Resource Type: software resource
Defining Citation: PMID:24894502
Keywords: python, bio.tools
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