URL: http://www.bioinformatics.babraham.ac.uk/projects/bismark/
Proper Citation: Bismark (RRID:SCR_005604)
Description: Software tool to map bisulfite converted sequence reads and determine cytosine methylation states. Flexible aligner and methylation caller for Bisulfite-Seq applications. Used to map bisulfite treated sequencing reads to genome of interest and perform methylation calls in single step.
Abbreviations: Bismark
Resource Type: software resource
Defining Citation: PMID:21493656, DOI:10.1093/bioinformatics/btr167
Keywords: Map bisulfite treated sequence reads, determine cytosine methylation states, genome, sequence reads, perform methylation calls, bio.tools
Availability: Free, Available for download, Freely available
Resource Name: Bismark
Resource ID: SCR_005604
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
