URL: http://code.google.com/p/seqtrace/
Proper Citation: SeqTrace (RRID:SCR_005580)
Description: A software application for viewing and processing DNA sequencing chromatograms (trace files) that makes it easy to quickly generate high-quality finished sequences from a large number of trace files. SeqTrace can automatically identify, align, and compute consensus sequences from matching forward and reverse traces, filter low-quality base calls, and perform end trimming of finished sequences. The finished DNA sequences can then be exported to common sequence file formats, such as FASTA. SeqTrace also includes a full-featured trace file viewer and editor. You can view your sequencing chromatograms at a variety of scales and zoom levels, simultaneously view matching forward and reverse traces, edit the called bases, and export individual DNA sequences as well as forward/reverse alignments. SeqTrace supports popular trace file formats, including ABIF, SCF, and ZTR.
Abbreviations: SeqTrace
Synonyms: Seqtrace - User-friendly software for viewing and processing DNA sequencing trace files
Resource Type: data processing software, software resource, software application
Defining Citation: PMID:22942788
Keywords: dna sequencing trace file, dna sequencing, trace file, trace, python, gtk, chromatogram, graphic, sequence analysis, bio.tools
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