X
Forgot Password

If you have forgotten your password you can enter your email here and get a temporary password sent to your email.

Resource Name
RRID:SCR_004544 RRID Copied      
PDF Report How to cite
Genomedata (RRID:SCR_004544)
Copy Citation Copied
Resource Information

URL: http://noble.gs.washington.edu/proj/genomedata/

Proper Citation: Genomedata (RRID:SCR_004544)

Description: A format for efficient storage of multiple tracks of numeric data anchored to a genome. The format allows fast random access to hundreds of gigabytes of data, while retaining a small disk space footprint. They have also developed utilities to load data into this format. Retrieving data from this format is more than 2900 times faster than a naive approach using wiggle files. A reference implementation in Python and C components is available here under the GNU General Public License. The software has only been tested on Linux and Mac systems.

Abbreviations: Genomedata

Resource Type: software resource, source code

Defining Citation: PMID:20435580

Keywords: genome, data, format, linux, mac, functional genomics, function, bio.tools

Expand All
This resource

is listed by

OMICtools

is listed by

3DVC

is listed by

bio.tools

is listed by

Debian

has parent organization

University of Washington; Seattle; USA

Usage and Citation Metrics

We found {{ ctrl2.mentions.total_count }} mentions in open access literature.

We have not found any literature mentions for this resource.

We are searching literature mentions for this resource.

Most recent articles:

{{ mention._source.dc.creators[0].familyName }} {{ mention._source.dc.creators[0].initials }}, et al. ({{ mention._source.dc.publicationYear }}) {{ mention._source.dc.title }} {{ mention._source.dc.publishers[0].name }}, {{ mention._source.dc.publishers[0].volume }}({{ mention._source.dc.publishers[0].issue }}), {{ mention._source.dc.publishers[0].pagination }}. (PMID:{{ mention._id.replace('PMID:', '') }})

Checkfor all resource mentions.

Collaborator Network

A list of researchers who have used the resource and an author search tool

Find mentions based on location


{{ ctrl2.mentions.errors.location }}

A list of researchers who have used the resource and an author search tool. This is available for resources that have literature mentions.

Ratings and Alerts

No rating or validation information has been found for Genomedata.

No alerts have been found for Genomedata.

Data and Source Information