URL: http://elm.eu.org
Proper Citation: Eukaryotic Linear Motif (RRID:SCR_003085)
Description: Computational biology resource for investigating candidate functional sites in eukarytic proteins. Functional sites which fit to the description linear motif are currently specified as patterns using Regular Expression rules. To improve the predictive power, context-based rules and logical filters are being developed and applied to reduce the amount of false positives. The current version of the ELM server provides core functionality including filtering by cell compartment, phylogeny, globular domain clash (using the SMART/Pfam databases) and structure. In addition, both the known ELM instances and any positionally conserved matches in sequences similar to ELM instance sequences are identified and displayed (see ELM instance mapper). Although the ELM resource contains a large collection of functional site motifs, the current set of motifs is not exhaustive.
Abbreviations: ELM
Synonyms: Eukarotic Linear Motif resource for Functional Sites in Proteins
Resource Type: database, analysis service resource, production service resource, service resource, data or information resource, data analysis service
Defining Citation: PMID:22110040
Keywords: linear motif, regulatory protein, motif, protein sequence, functional site, prediction, disease, virus, cell compartment, phylogeny, globular domain clash, structure, protein, bio.tools, FASEB list
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