URL: http://pallab.serc.iisc.ernet.in/gester/
Proper Citation: WebGeSTer DB (RRID:SCR_002165)
Description: Database of intrinsic terminators of transcription that is comprized of >2,200,000 bacterial terminators identified from a total of 2036 chromosomes and 1508 plasmids. Information about structural parameters of individual terminators such as sequence, length of stem and loop, mismatches and gaps, U-trail, genomic coordinates and gene name and accession number is available in both tabular form and as a composite figure. Summary statistics for terminator profiles of whole genome can be also obtained. Raw data files for individual genomes can be downloaded (.zip files) for detailed investigations. Data is organized into different tiers such that users can fine-tune their search by entering name of the species, or taxon ID or genomes with a certain number of terminators. To visualize the occurrence of the terminators, an interactive map, with the resolution to single gene level, has been developed.
Abbreviations: WebGeSTer DB
Synonyms: WebGesTer Database, Web Genome Scannner for Terminators Database, WebGeSTer DB - A Transcription Terminator Database
Resource Type: data or information resource, database
Defining Citation: PMID:20972211
Keywords: genome, terminator, transcription, plasmid, bio.tools
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