URL: https://github.com/ruanjue/smartdenovo
Proper Citation: SMARTdenovo (RRID:SCR_017622)
Description: Software tool as de novo assembler for PacBio and Oxford Nanopore data. It produces assembly from all-vs-all raw read alignments without error correction stage. Allows to read overlapping, rescue missing overlaps, identify low-quality regions and chimaera and produce better consensus.
Resource Type: image analysis software, software resource, data processing software, software application, alignment software
Keywords: De novo, assembler, PacBio, Oxford Nanopore, data, sequence, raw, read, alignment, error, bio.tools
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