URL: http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/
Proper Citation: Trim Galore (RRID:SCR_011847)
Description: Software tool to automate quality and adapter trimming as well as quality control, with some added functionality to remove biased methylation positions for RRBS sequence files for directional, non-directional or paired-end sequencing. Wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for Reduced Representation Bisulfite Sequencing data.
Abbreviations: Trim Galore!
Synonyms: TrimGalore
Resource Type: data processing software, software application, software resource
Keywords: Automate, quality, adapter, trimming, remove, biased, methylation, position, RRBS, reduced, representation, bisulfite, data, sequence, wrapper, bio.tools
Availability: Free, Available for download, Freely available
Resource Name: Trim Galore
Resource ID: SCR_011847
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- Used for sequencing service by the Human Islet Research Network community. Contact(s): Golnaz Vahedi, Klaus Kaestner - Human Islets Research Network https://hirnetwork.org/
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
