URL: http://www.unc.edu/~yunmli/MaCH-Admix/
Proper Citation: MaCH-Admix (RRID:SCR_009598)
Description: A genotype imputation software that is an extension to MaCH for faster and more flexible imputaiton, especially in admixed populations. It has incorporated a novel piecewise reference selection method to create reference panels tailored for target individual(s). This reference selection method generates better imputation quality in shorter running time. MaCH-Admix also separates model parameter estimation from imputation. The separation allows users to perform imputation with standard reference panels + pre-calibrated parameters in a data independent fashion. Alternatively, if one works with study-specific reference panels, or isolated target population, one has the option to simultaneously estimate these model parameters while performing imputation. MaCH-Admix has included many other useful options and supports VCF input files. All existing MaCH documentation applies to MaCH-Admix.
Synonyms: MaCH-Admix: Genotype Imputation Software
Resource Type: software application, software resource
Defining Citation: PMID:23074066
Keywords: genomic analysis, imaging genomics, imputation, snp, gene, bio.tools
Availability: Free, Non-commercial, Acknowledgement requested
Resource Name: MaCH-Admix
Resource ID: SCR_009598
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University of North Carolina at Chapel Hill; North Carolina; USA |
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
