URL: http://www.genetics.ucla.edu/software/admixture/
Proper Citation: ADMIXTURE (RRID:SCR_001263)
Description: A software tool for maximum likelihood estimation of individual ancestries from multilocus SNP genotype datasets. It uses the same statistical model as STRUCTURE but calculates estimates much more rapidly using a fast numerical optimization algorithm. It uses a block relaxation approach to alternately update allele frequency and ancestry fraction parameters. Each block update is handled by solving a large number of independent convex optimization problems, which are tackled using a fast sequential quadratic programming algorithm. Convergence of the algorithm is accelerated using a novel quasi-Newton acceleration method.
Abbreviations: ADMIXTURE
Synonyms: ADMIXTURE: fast ancestry estimation
Resource Type: software resource
Defining Citation: PMID:19648217
Keywords: ancestry, macos x, linux, admixture, allele, genome, single nucleotide polymorphism, bio.tools
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