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Cancer Risk Stratification of Anal Intraepithelial Neoplasia in Human Immunodeficiency Virus-Positive Men by Validated Methylation Markers Associated With Progression to Cancer.

Ramon P van der Zee | Olivier Richel | Carel J M van Noesel | Iuliana Ciocănea-Teodorescu | Annina P van Splunter | Timo J Ter Braak | Mayura Nathan | Tamzin Cuming | Michael Sheaff | Alexander Kreuter | Chris J L M Meijer | Wim G V Quint | Henry J C de Vries | Jan M Prins | Renske D M Steenbergen
Clinical infectious diseases : an official publication of the Infectious Diseases Society of America | 2021

High-grade anal intraepithelial neoplasia (HGAIN; AIN2-3) is highly prevalent in HIV+ men, but only a minority of these lesions progress towards cancer. Currently, cancer progression risk cannot be established; therefore, no consensus exists on whether HGAIN should be treated. This study aimed to validate previously identified host cell DNA methylation markers for detection and cancer risk stratification of HGAIN.

Pubmed ID: 32266940

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ggplot2 (tool)

RRID:SCR_014601

Open source software package for statistical programming language R to create plots based on grammar of graphics. Used for data visualization to break up graphs into semantic components such as scales and layers.

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