Searching the Resource Information Network
Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
We describe a new fish blood fluke (Digenea: Aporocotylidae: Electrovermis zappum n. gen., n. sp.) and its life cycle in the intertidal zone adjacent to Mobile Bay (north-central Gulf of Mexico). This is the first elucidated aporocotylid life cycle that includes a chondrichthyan definitive host or a bivalve intermediate host. The new species undergoes asexual reproduction within the gonad of the variable coquina clam before maturing in the heart of the lesser electric ray. These adults and cercariae had identical 28S, 18S, and ITS2 nucleotide sequences. The new genus is similar to Ogawaia Cutmor et al., 2018 by having an inverse U-shaped intestine, a looping testis, and a uterus having distinct ascending and descending segments. It differs by having a body that is ≥ 30 × longer than wide, a testis with >30 curves, an obvious cirrus sac enveloping an extremely elongate cirrus, an ovary anterior to the seminal vesicle, and a post-gonadal uterus. The new species further differs from the type species of Ogawaia (Ogawaia glaucostegi Cutmore et al., 2018) by having a massive seminal vesicle (>10% of body length), a cirrus sac enveloping an extremely elongate cirrus, and a slightly sinuous uterus. Histology confirmed gametogenesis in an infected coquina clam but no discernible cellular response to infection was observed. We also i) characterize a second morphologically and genetically distinct cercaria (perhaps representing an innominate chondrichthyan aporocotylid) infecting the green jackknife clam in Mississippi Sound (north-central Gulf of Mexico), ii) compare all known aporocotylid cercariae infecting estuarine and marine mollusks and polychaetes and iii) provide a key to identify those cercariae. A phylogenetic analysis including nucleotide sequences from adult and cercarial specimens of the newly collected fish blood flukes further supports the notion that chondrichthyan aporocotylids are monophyletic and use bivalves as the first intermediate host; perhaps unlike any other blood fluke lineage.
Pubmed ID: 31667079
Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.
NIH genetic sequence database that provides annotated collection of all publicly available DNA sequences for almost 280 000 formally described species (Jan 2014) .These sequences are obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects, including whole-genome shotgun (WGS) and environmental sampling projects. Most submissions are made using web-based BankIt or standalone Sequin programs, and GenBank staff assigns accession numbers upon data receipt. It is part of International Nucleotide Sequence Database Collaboration and daily data exchange with European Nucleotide Archive (ENA) and DNA Data Bank of Japan (DDBJ) ensures worldwide coverage. GenBank is accessible through NCBI Entrez retrieval system, which integrates data from major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of GenBank database are available by FTP.
View all literature mentionsA graphical viewer of phylogenetic trees and a program for producing publication-ready figures. It is designed to display summarized and annotated trees produced by BEAST.
View all literature mentionsVector graphics software to create digital graphics, illustrations, and typography for several types of media: print, web, interactive, video, and mobile.
View all literature mentionsSoftware package for sequence alignment, assembly and analysis. Integrated and extendable desktop software platform for organization and analysis of sequence data. Bioinformatics software platform packed with molecular biology and sequence analysis tools.
View all literature mentionsSoftware package as multiple alignment program for amino acid or nucleotide sequences. Can align up to 500 sequences or maximum file size of 1 MB. First version of MAFFT used algorithm based on progressive alignment, in which sequences were clustered with help of Fast Fourier Transform. Subsequent versions have added other algorithms and modes of operation, including options for faster alignment of large numbers of sequences, higher accuracy alignments, alignment of non-coding RNA sequences, and addition of new sequences to existing alignments.
View all literature mentionsTHIS RESOURCE IS NO LONGER IN SERVICE.Documented on February 28,2023. Software program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models.
View all literature mentionsSoftware tool used to carry out statistical selection of best-fit models of nucleotide substitution without the aid of PAUP*. It implements five different model selection strategies: hierarchical and dynamical likelihood ratio tests, Akaike and Bayesian information criteria, and a decision theory method. It also provides estimates of model selection uncertainty, parameter importances, and model-averaged parameter estimates.
View all literature mentions