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Understanding the kidney one cell at a time.

Jihwan Park | Chang Linda Liu | Junhyong Kim | Katalin Susztak
Kidney international | 2019

A revolution in cellular measurement technology is underway. Whereas prior studies have been able to analyze only the averaged outputs from renal tissue, we now can accurately monitor genome-wide gene expression, regulation, function, cellular history, and cellular interactions in thousands of individual cells in a single experiment. These methods are key drivers in changing our previous morphotype-based organ and disease descriptions to unbiased genomic definitions and therefore improving our understanding of kidney development, homeostasis, and disease.

Pubmed ID: 31492507

Research resources used in this publication

None found

Antibodies used in this publication

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Associated grants

  • Agency: NIDDK NIH HHS, United States
    Id: DP3 DK108220
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK076077
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK087635
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK105821
  • Agency: NIDDK NIH HHS, United States
    Id: U01 DK107350

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Bioinformatic Harvester IV (beta) at Karlsruhe Institute of Technology (tool)

RRID:SCR_008017

Harvester is a Web-based tool that bulk-collects bioinformatic data on human proteins from various databases and prediction servers. It is a meta search engine for gene and protein information. It searches 16 major databases and prediction servers and combines the results on pregenerated HTML pages. In this way Harvester can provide comprehensive gene-protein information from different servers in a convenient and fast manner. As full text meta search engine, similar to Google trade mark, Harvester allows screening of the whole genome proteome for current protein functions and predictions in a few seconds. With Harvester it is now possible to compare and check the quality of different database entries and prediction algorithms on a single page. Sponsors: This work has been supported by the BMBF with grants 01GR0101 and 01KW0013.

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