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Chronically implanted Neuropixels probes enable high-yield recordings in freely moving mice.

Ashley L Juavinett | George Bekheet | Anne K Churchland
eLife | 2019

The advent of high-yield electrophysiology using Neuropixels probes is now enabling researchers to simultaneously record hundreds of neurons with remarkably high signal to noise. However, these probes have not been well-suited to use in freely moving mice. It is critical to study neural activity in unrestricted animals for many reasons, such as leveraging ethological approaches to study neural circuits. We designed and implemented a novel device that allows Neuropixels probes to be customized for chronically implanted experiments in freely moving mice. We demonstrate the ease and utility of this approach in recording hundreds of neurons during an ethological behavior across weeks of experiments. We provide the technical drawings and procedures for other researchers to do the same. Importantly, our approach enables researchers to explant and reuse these valuable probes, a transformative step which has not been established for recordings with any type of chronically-implanted probe.

Pubmed ID: 31411559

Research resources used in this publication

None found

Antibodies used in this publication

None found

Associated grants

  • Agency: Simons Foundation, International
    Id: Simons Collaboration on the Global Brain
  • Agency: Pew Charitable Trusts, International
    Id: Pew Scholars
  • Agency: Eleanor Schwartz Fund, International
    Id: Scholar Award
  • Agency: Cold Spring Harbor Laboratory, International
    Id: Marie Robertson
  • Agency: National Science Foundation, International
    Id: 1559816
  • Agency: Pew Foundation, International
    Id: Pew Scholars
  • Agency: Eleanor Schwartz Fund, International
    Id: Scholar award

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This is a list of tools and resources that we have found mentioned in this publication.


MATLAB (tool)

RRID:SCR_001622

Multi paradigm numerical computing environment and fourth generation programming language developed by MathWorks. Allows matrix manipulations, plotting of functions and data, implementation of algorithms, creation of user interfaces, and interfacing with programs written in other languages, including C, C++, Java, Fortran and Python. Used to explore and visualize ideas and collaborate across disciplines including signal and image processing, communications, control systems, and computational finance.

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Cold Spring Harbor Laboratory (tool)

RRID:SCR_008326

Non profit, private research and education institution that performs molecular and genetic research used to generate methods for better diagnostics and treatments for cancer and neurological diseases. Research of cancer causing genes and their respective signaling pathways, mutations and structural variations of the human genome that could cause neurodevelopmental and neurodegenerative illnesses such as autism, schizophrenia, and Alzheimer's and Parkinson's diseases and also research in plant genetics and quantitative biology.

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C57BL/6J (tool)

RRID:IMSR_JAX:000664

Mus musculus with name C57BL/6J from IMSR.

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