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The ATP-Binding Cassette Gene ABCF1 Functions as an E2 Ubiquitin-Conjugating Enzyme Controlling Macrophage Polarization to Dampen Lethal Septic Shock.

Hitesh Arora | Sara Morgan Wilcox | Laura Alexandra Johnson | Lonna Munro | Brett Alexander Eyford | Cheryl Gurine Pfeifer | Ian Welch | Wilfred Arthur Jefferies
Immunity | 2019

Sepsis is a bi-phasic inflammatory disease that threatens approximately 30 million lives and claims over 14 million annually, yet little is known regarding the molecular switches and pathways that regulate this disease. Here, we have described ABCF1, an ATP-Binding Cassette (ABC) family member protein, which possesses an E2 ubiquitin enzyme activity, through which it controls the Lipopolysaccharide (LPS)- Toll-like Receptor-4 (TLR4) mediated gram-negative insult by targeting key proteins for K63-polyubiquitination. Ubiquitination by ABCF1 shifts the inflammatory profile from an early phase MyD88-dependent to a late phase TRIF-dependent signaling pathway, thereby regulating TLR4 endocytosis and modulating macrophage polarization from M1 to M2 phase. Physiologically, ABCF1 regulates the shift from the inflammatory phase of sepsis to the endotoxin tolerance phase, and modulates cytokine storm and interferon-β (IFN-β)-dependent production by the immunotherapeutic mediator, SIRT1. Consequently, ABCF1 controls sepsis induced mortality by repressing hypotension-induced renal circulatory dysfunction.

Pubmed ID: 30770245

Antibodies used in this publication

Associated grants

  • Agency: CIHR, Canada
    Id: MOP-86739
  • Agency: CIHR, Canada
    Id: MOP-133634

Publication data is provided by the National Library of Medicine ® and PubMed ®. Data is retrieved from PubMed ® on a weekly schedule. For terms and conditions see the National Library of Medicine Terms and Conditions.

This is a list of tools and resources that we have found mentioned in this publication.


Addgene (tool)

RRID:SCR_002037

Non-profit plasmid repository dedicated to helping scientists around the world share high-quality plasmids. Facilitates archiving and distributing DNA-based research reagents and associated data to scientists worldwide. Repository contains over 65,000 plasmids, including special collections on CRISPR, fluorescent proteins, and ready-to-use viral preparations. There is no cost for scientists to deposit plasmids, which saves time and money associated with shipping plasmids themselves. All plasmids are fully sequenced for validation and sequencing data is openly available. We handle the appropriate Material Transfer Agreements (MTA) with institutions, facilitating open exchange and offering intellectual property and liability protection for depositing scientists. Furthermore, we curate free educational resources for the scientific community including a blog, eBooks, video protocols, and detailed molecular biology resources.

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GraphPad Prism (tool)

RRID:SCR_002798

Statistical analysis software that combines scientific graphing, comprehensive curve fitting (nonlinear regression), understandable statistics, and data organization. Designed for biological research applications in pharmacology, physiology, and other biological fields for data analysis, hypothesis testing, and modeling.

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GenScript (tool)

RRID:SCR_002891

Commercial organization which provides life science services and products to researchers. They specialize in gene synthesis, peptide, protein, antibody and preclinical drug development service.

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Abcam (tool)

RRID:SCR_012931

A commercial antibody supplier which supplies primary and secondary antibodies, biochemicals, proteins, peptides, lysates, immunoassays and other kits.

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Caspase 1 antibody [EPR4321] (antibody)

RRID:AB_10858984

This monoclonal targets Caspase 1 antibody [EPR4321]

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K63-linkage Specific Polyubiquitin (D7A11) Rabbit mAb (antibody)

RRID:AB_10827985

This monoclonal targets K63-linkage Specific Polyubiquitin (D7A11) Rabbit mAb

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GFP-avictoria (antibody)

RRID:AB_303395

This polyclonal targets GFP

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NAK antibody [EP611Y] (antibody)

RRID:AB_776632

This monoclonal targets NAK

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APC anti-mouse CD284 (TLR4) (antibody)

RRID:AB_2562503

This monoclonal targets CD284

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caspase-1 p10 (M-20) (antibody)

RRID:AB_2068895

This polyclonal targets caspase-1 p10

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APC anti-mouse CD86 (antibody)

RRID:AB_493343

This monoclonal targets CD86

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HA-Tag Antibody (F-7) (antibody)

RRID:AB_627809

This monoclonal targets HA-Tag

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TRAF3 (G-6) (antibody)

RRID:AB_628390

This monoclonal targets TRAF3

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Phospho-IRF-3 (Ser396) (4D4G) Rabbit mAb (antibody)

RRID:AB_823547

This monoclonal targets Phospho-IRF-3 (Ser396)

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TRAF6 (D-10) (antibody)

RRID:AB_628391

This monoclonal targets TRAF6

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IKB alpha (phospho S32 + S36) antibody [39A1431] (antibody)

RRID:AB_298874

This monoclonal targets IKB alpha (phospho S32 + S36)

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Anti-Ubiquitin Antibody (P4D1) (antibody)

RRID:AB_628423

This monoclonal targets Ubiquitin

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ABCF1 Polyclonal Antibody (antibody)

RRID:AB_2547429

This unknown targets ABCF1

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IRF-3 (C-20) (antibody)

RRID:AB_2127008

This polyclonal targets IRF3

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Anti-Caspase-3 antibody (antibody)

RRID:AB_443014

This polyclonal targets Caspase-3

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NAK (phospho S172) antibody [EPR2867(2)] (antibody)

RRID:AB_10862438

This monoclonal targets NAK (phospho S172) antibody [EPR2867(2)]

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PLC gamma2 (B-10) (antibody)

RRID:AB_628120

This monoclonal targets PLCG2

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mCherry Polyclonal Antibody (antibody)

RRID:AB_2552323

This unknown targets mCherry

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A20 (4H16) (antibody)

RRID:AB_1118494

This monoclonal targets Human TNFAIP3

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Anti-Histone H3 (tri methyl K4) antibody - ChIP Grade (antibody)

RRID:AB_306649

This polyclonal targets Histone H3 (tri methyl K4)

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ASC Antibody (antibody)

RRID:AB_2737351

This monoclonal targets ASC

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K48-linkage Specific Polyubiquitin Antibody (antibody)

RRID:AB_10557239

This polyclonal targets K48-linkage Specific Polyubiquitin

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ABCF1 antibody (antibody)

RRID:AB_2242044

This polyclonal targets ABCF1

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TAK1 antibody [EPR5984] (antibody)

RRID:AB_10860657

This monoclonal targets TAK1 antibody [EPR5984]

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c-IAP1 (D-19) (antibody)

RRID:AB_2063798

This polyclonal targets c-IAP1

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Cleaved Caspase-3 (Asp175) Antibody (antibody)

RRID:AB_2341188

This polyclonal targets Cleaved Caspase-3 (Asp175)

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TRIF antibody (antibody)

RRID:AB_2201578

This polyclonal targets TRIF

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APC anti-mouse CD284 (TLR4) (antibody)

RRID:AB_2562503

This monoclonal targets CD284

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