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Publication

Complete Genome Sequences of Six Human Bocavirus Strains from Patients with Acute Gastroenteritis in the North Region of Brazil.

Aripuanã Sakurada Aranha Watanabe | Adriana Luchs | Élcio Leal | Flavio Augusto de Pádua Milagres | Shirley Vasconcelos Komninakis | Danielle Elise Gill | Márcia Cristina Alves Brito Sayão Lobato | Rafael Brustulin | Rogério Togisaki das Chagas | Maria de Fátima Neves Dos Santos Abrão | Cassia Vitória de Deus Alves Soares | Xutao Deng | Ester Cerdeira Sabino | Eric Delwart | Antonio Charlys da Costa
Genome announcements | 2018

Human bocavirus (HBoV) is commonly associated with acute respiratory tract illness and gastroenteritis. We report six complete genomic sequences of HBoV strains from patients with gastroenteritis in Belém do Pará and Tocantins in the North Region of Brazil. Phylogenetic analysis indicated that the six HBoV strains belong to genotypes 1, 2, and 3.

Pubmed ID: 29700140

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FastTree (tool)

RRID:SCR_015501

Source code that infers approximately-maximum-likelihood phylogenetic trees from alignments of nucleotide or protein sequences. It uses the Jukes-Cantor or generalized time-reversible (GTR) models of nucleotide evolution and the JTT, WAG, or LG models of amino acid evolution.

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The PRECISE-TBI toolbox are a collection tools and resources to increase rigor and reproducibility with Traumatic Brain Injury within the PRE Clinical Interagency reSearch resourcE - Traumatic Brain Injury (PRECISE-TBI). Please learn more about PRECISE-TBI at https://www.precise-tbi.org

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