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Linking two DNA duplexes with a rigid linker for DNA nanotechnology.

Ryu Tashiro | Masahiro Iwamoto | Hironobu Morinaga | Tomoko Emura | Kumi Hidaka | Masayuki Endo | Hiroshi Sugiyama
Nucleic acids research | 2015

DNA has recently emerged as a promising material for the construction of nanosized architectures. Chemically modified DNA has been suggested to be an important component of such architectural building blocks. We have designed and synthesized a novel H-shaped DNA oligonucleotide dimer that is cross-linked with a structurally rigid linker composed of phenylene and ethynylene groups. A rotatable DNA unit was constructed through the self-assembly of this H-shaped DNA component and two complementary DNA oligonucleotides. In addition to the rotatable unit, a locked DNA unit containing two H-shaped DNA components was also constructed. As an example of an extended locked structure, a hexagonal DNA origami dimer and oligomer were constructed by using H-shaped DNA as linkers.

Pubmed ID: 26130712

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