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Local functional descriptors for surface comparison based binding prediction.

Gregory M Cipriano | George N Phillips | Michael Gleicher
BMC bioinformatics | 2012

Molecular recognition in proteins occurs due to appropriate arrangements of physical, chemical, and geometric properties of an atomic surface. Similar surface regions should create similar binding interfaces. Effective methods for comparing surface regions can be used in identifying similar regions, and to predict interactions without regard to the underlying structural scaffold that creates the surface.

Pubmed ID: 23176080

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Associated grants

  • Agency: NLM NIH HHS, United States
    Id: 5T15LM007359

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MSMS (tool)

RRID:SCR_003532

A coalescent simulation software program for a structured population including recombination, demographic structure and selection at a single diploid locus.

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