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Targeted high-throughput sequencing for diagnosis of genetically heterogeneous diseases: efficient mutation detection in Bardet-Biedl and Alström syndromes.

Claire Redin | Stéphanie Le Gras | Oussema Mhamdi | Véronique Geoffroy | Corinne Stoetzel | Marie-Claire Vincent | Pietro Chiurazzi | Didier Lacombe | Ines Ouertani | Florence Petit | Marianne Till | Alain Verloes | Bernard Jost | Habiba Bouhamed Chaabouni | Helene Dollfus | Jean-Louis Mandel | Jean Muller
Journal of medical genetics | 2012

Bardet-Biedl syndrome (BBS) is a pleiotropic recessive disorder that belongs to the rapidly growing family of ciliopathies. It shares phenotypic traits with other ciliopathies, such as Alström syndrome (ALMS), nephronophthisis (NPHP) or Joubert syndrome. BBS mutations have been detected in 16 different genes (BBS1-BBS16) without clear genotype-to-phenotype correlation. This extensive genetic heterogeneity is a major concern for molecular diagnosis and genetic counselling. While various strategies have been recently proposed to optimise mutation detection, they either fail to detect mutations in a majority of patients or are time consuming and costly.

Pubmed ID: 22773737

Research resources used in this publication

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This is a list of tools and resources that we have found mentioned in this publication.


MutationTaster (tool)

RRID:SCR_010777

Evaluates disease-causing potential of sequence alterations.

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SIFT (tool)

RRID:SCR_012813

Data analysis service to predict whether an amino acid substitution affects protein function based on sequence homology and the physical properties of amino acids. SIFT can be applied to naturally occurring nonsynonymous polymorphisms and laboratory-induced missense mutations. (entry from Genetic Analysis Software) Web service is also available.

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