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Transcriptome analysis of amoeboid and ramified microglia isolated from the corpus callosum of rat brain.

Rangarajan Parakalan | Boran Jiang | Baby Nimmi | Manivannan Janani | Manikandan Jayapal | Jia Lu | Samuel S W Tay | Eng-Ang Ling | S Thameem Dheen
BMC neuroscience | 2012

Microglia, the resident immune cells of the central nervous system (CNS), have two distinct phenotypes in the developing brain: amoeboid form, known to be amoeboid microglial cells (AMC) and ramified form, known to be ramified microglial cells (RMC). The AMC are characterized by being proliferative, phagocytic and migratory whereas the RMC are quiescent and exhibit a slow turnover rate. The AMC transform into RMC with advancing age, and this transformation is indicative of the gradual shift in the microglial functions. Both AMC and RMC respond to CNS inflammation, and they become hypertrophic when activated by trauma, infection or neurodegenerative stimuli. The molecular mechanisms and functional significance of morphological transformation of microglia during normal development and in disease conditions is not clear. It is hypothesized that AMC and RMC are functionally regulated by a specific set of genes encoding various signaling molecules and transcription factors.

Pubmed ID: 22697290

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Gene Expression Omnibus (GEO) (tool)

RRID:SCR_007303

Functional genomics data repository supporting MIAME-compliant data submissions. Includes microarray-based experiments measuring the abundance of mRNA, genomic DNA, and protein molecules, as well as non-array-based technologies such as serial analysis of gene expression (SAGE) and mass spectrometry proteomic technology. Array- and sequence-based data are accepted. Collection of curated gene expression DataSets, as well as original Series and Platform records. The database can be searched using keywords, organism, DataSet type and authors. DataSet records contain additional resources including cluster tools and differential expression queries.

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WI (tool)

RRID:RGD_13508588

Rattus norvegicus with name WI from RGD.

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BV-2 (tool)

RRID:CVCL_0182

Cell line BV-2 is a Transformed cell line with a species of origin Mus musculus (Mouse)

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