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A transcriptional-switch model for Slr1738-controlled gene expression in the cyanobacterium Synechocystis.

Paul Garcin | Olivier Delalande | Ju-Yuan Zhang | Corinne Cassier-Chauvat | Franck Chauvat | Yves Boulard
BMC structural biology | 2012

Protein-DNA interactions play a crucial role in the life of biological organisms in controlling transcription, regulation, as well as DNA recombination and repair. The deep understanding of these processes, which requires the atomic description of the interactions occurring between the proteins and their DNA partners is often limited by the absence of a 3D structure of such complexes.

Pubmed ID: 22289274

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This is a list of tools and resources that we have found mentioned in this publication.


AMBER (tool)

RRID:SCR_016151

Software toolkit for the comparative assessment of genome reconstructions from metagenome benchmark datasets. It provides performance metrics, results rankings, and comparative visualizations for assessing multiple programs or parameter effects.

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MSMS (tool)

RRID:SCR_003532

A coalescent simulation software program for a structured population including recombination, demographic structure and selection at a single diploid locus.

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