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Functional analysis of microRNAs in human hepatocellular cancer stem cells.

Fanyin Meng | Shannon S Glaser | Heather Francis | Sharon DeMorrow | Yuyan Han | Jenna D Passarini | Allison Stokes | John P Cleary | Xiuping Liu | Julie Venter | Preetham Kumar | Sally Priester | Levi Hubble | Dustin Staloch | Jay Sharma | Chang-Gong Liu | Gianfranco Alpini
Journal of cellular and molecular medicine | 2012

MicroRNAs are endogenous small non-coding RNAs that regulate gene expression and cancer development. A rare population of hepatocellular cancer stem cells (HSCs) holds the extensive proliferative and self-renewal potential necessary to form a liver tumour. We postulated that specific transcriptional factors might regulate the expression of microRNAs and subsequently modulate the expression of gene products involved in phenotypic characteristics of HSCs. We evaluated the expression of microRNA in human HSCs by microarray profiling, and defined the target genes and functional effects of two groups of microRNA regulated by IL-6 and transcriptional factor Twist. A subset of highly chemoresistant and invasive HSCs was screened with aberrant expressions of cytokine IL-6 and Twist. We demonstrated that conserved let-7 and miR-181 family members were up-regulated in HSCs by global microarray-based microRNA profiling followed by validation with real-time polymerase chain reaction. Importantly, inhibition of let-7 increases the chemosensitivity of HSCs to sorafenib and doxorubicin whereas silencing of miR-181 led to a reduction in HSCs motility and invasion. Knocking down IL-6 and Twist in HSCs significantly reduced let-7 and miR-181 expression and subsequently inhibited chemoresistance and cell invasion. We showed that let-7 directly targets SOCS-1 and caspase-3, whereas miR-181 directly targets RASSF1A, TIMP3 as well as nemo-like kinase (NLK). In conclusion, alterations of IL-6- and Twist-regulated microRNA expression in HSCs play a part in tumour spreading and responsiveness to chemotherapy. Our results define a novel regulatory mechanism of let-7/miR-181s suggesting that let-7 and miR-181 may be molecular targets for eradication of hepatocellular malignancies.

Pubmed ID: 21352471

Research resources used in this publication

None found

Antibodies used in this publication

None found

Associated grants

  • Agency: NIDDK NIH HHS, United States
    Id: K01-DK078532
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK054811-09
  • Agency: NIDDK NIH HHS, United States
    Id: R01-DK081442
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK081442
  • Agency: NIDDK NIH HHS, United States
    Id: K01 DK078532
  • Agency: NIDDK NIH HHS, United States
    Id: R01-DK054811
  • Agency: NIDDK NIH HHS, United States
    Id: R01 DK054811

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This is a list of tools and resources that we have found mentioned in this publication.


miRBase (tool)

RRID:SCR_003152

Central online repository for microRNA nomenclature, sequence data, annotation and target prediction.Collection of published miRNA sequences and annotation.

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TargetScan (tool)

RRID:SCR_010845

Web tool to predict biological targets of miRNAs by searching for presence of conserved 8mer, 7mer and 6mer sites that match seed region of each miRNA. Nonconserved sites are also predicted and sites with mismatches in seed region that are compensated by conserved 3' pairing. Used to search for predicted microRNA targets in mammals.

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BRB-ArrayTools (tool)

RRID:SCR_010938

An integrated software package for the visualization and statistical analysis of DNA microarray gene expression data.

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Hep-G2 (tool)

RRID:CVCL_0027

Cell line Hep-G2 is a Cancer cell line with a species of origin Homo sapiens (Human)

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