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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00051988
Source Database: WormBase (WB)
Affected Genes: WBGene00004949(sox-2)
Genomic Alteration: WBGene00004949(sox-2)
Availability: unknown
Source References: PMID:34312566, PMID:38461413
Synonyms: ujIs113 II; sox-2(dev153([sox-2::mNeonGreen]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of sox-2 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051988 Copy
http://www.wormbase.org/db/get?name=WBStrain00051987
Source Database: WormBase (WB)
Affected Genes: WBGene00003012(lin-26)
Genomic Alteration: WBGene00003012(lin-26)
Availability: unknown
Source References: PMID:34312566
Synonyms: lin-26(dev150([mNeonGreen::lin-26]) ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of lin-26 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051987 Copy
http://www.wormbase.org/db/get?name=WBStrain00051985
Source Database: WormBase (WB)
Affected Genes: WBGene00006873(vab-7)
Genomic Alteration: WBGene00006873(vab-7)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; vab-7(dev142([mNeonGreen::vab-7]) III.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of vab-7 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051985 Copy
http://www.wormbase.org/db/get?name=WBStrain00052022
Source Database: WormBase (WB)
Affected Genes: WBGene00006380(tab-1)
Genomic Alteration: WBGene00006380(tab-1)
Availability: unknown
Source References: PMID:34312566
Synonyms: tab-1(dev211([mNeonGreen::tab-1]) ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of tab-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052022 Copy
http://www.wormbase.org/db/get?name=WBStrain00052023
Source Database: WormBase (WB)
Affected Genes: WBGene00017690(ceh-60)
Genomic Alteration: WBGene00017690(ceh-60)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; ceh-60(dev212([mNeonGreen::ceh-60]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ceh-60 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052023 Copy
http://www.wormbase.org/db/get?name=WBStrain00052024
Source Database: WormBase (WB)
Affected Genes: WBGene00001981(hnd-1)
Genomic Alteration: WBGene00001981(hnd-1)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; hnd-1(dev213([mNeonGreen::hnd-1]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of hnd-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052024 Copy
http://www.wormbase.org/db/get?name=WBStrain00051973
Source Database: WormBase (WB)
Affected Genes: WBGene00017326(dmd-5)
Genomic Alteration: WBGene00017326(dmd-5)
Availability: unknown
Source References: PMID:34312566
Synonyms: dmd-5(dev104([mNeonGreen::dmd-5]) ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of dmd-5 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051973 Copy
http://www.wormbase.org/db/get?name=WBStrain00052029
Source Database: WormBase (WB)
Affected Genes: WBGene00003639(nhr-49)
Genomic Alteration: WBGene00003639(nhr-49)
Availability: unknown
Source References: PMID:34312566
Synonyms: nhr-49(dev169([nhr-49::mNeonGreen]) I; ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of nhr-49 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052029 Copy
http://www.wormbase.org/db/get?name=WBStrain00051977
Source Database: WormBase (WB)
Affected Genes: WBGene00007772(egrh-1)
Genomic Alteration: WBGene00007772(egrh-1)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; egrh-1(dev113([mNeonGreen::egrh-1]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of egrh-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051977 Copy
http://www.wormbase.org/db/get?name=WBStrain00051976
Source Database: WormBase (WB)
Affected Genes: WBGene00000469(ces-2)
Genomic Alteration: WBGene00000469(ces-2)
Availability: unknown
Source References: PMID:34312566
Synonyms: ces-2(dev112([mNeonGreen::ces-2]) I; ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ces-2 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051976 Copy
http://www.wormbase.org/db/get?name=WBStrain00052027
Source Database: WormBase (WB)
Affected Genes: WBGene00006773(unc-37)
Genomic Alteration: WBGene00006773(unc-37)
Availability: unknown
Source References: PMID:34312566
Synonyms: unc-37(dev218([mNeonGreen::unc-37]) I; ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of unc-37 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052027 Copy
http://www.wormbase.org/db/get?name=WBStrain00051979
Source Database: WormBase (WB)
Affected Genes: WBGene00012317(ztf-6)
Genomic Alteration: WBGene00012317(ztf-6)
Availability: unknown
Source References: PMID:34312566
Synonyms: ztf-6(dev122([mNeonGreen::ztf-6]) I; ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of ztf-6 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051979 Copy
http://www.wormbase.org/db/get?name=WBStrain00051978
Source Database: WormBase (WB)
Affected Genes: WBGene00001958(hlh-14)
Genomic Alteration: WBGene00001958(hlh-14)
Availability: unknown
Source References: PMID:34312566
Synonyms: hlh-14(dev119([mNeonGreen::hlh-14]) ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of hlh-14 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051978 Copy
http://www.wormbase.org/db/get?name=WBStrain00052012
Source Database: WormBase (WB)
Affected Genes: WBGene00001824(hbl-1)
Genomic Alteration: WBGene00001824(hbl-1)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; hbl-1(dev198([hbl-1::mNeonGreen]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of hbl-1 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052012 Copy
http://www.wormbase.org/db/get?name=WBStrain00052013
Source Database: WormBase (WB)
Affected Genes: WBGene00001182(egl-13)
Genomic Alteration: WBGene00001182(egl-13)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; egl-13(dev199([egl-13::mNeonGreen]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of egl-13 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052013 Copy
http://www.wormbase.org/db/get?name=WBStrain00051962
Source Database: WormBase (WB)
Affected Genes: WBGene00001182(egl-13)|WBGene00002957(let-858)
Genomic Alteration: WBGene00001182(egl-13), WBGene00002957(let-858)
Availability: unknown
Source References: EMPTY
Synonyms: he317[eft-3p::Lox2272::egl-13-NLS::tagBFP2::let-858 3'UTR::Lox2272::egl-13-NLS::mCherry::let-858 3'UTR] IV; heSi220 X.
Notes: heSi220 [lin-31p::Cre] X. Vulval lineage is marked through activity of a Cre-dependent reporter (blue-to-red switch). All cells in the animal are expressing BFP, except for vulval cells which are expressing mCherry. he317 was inserted into the cxTi10816 site using CRISPR/Cas9. Reference: van der Vaart A, et al. Sci. Adv. 2020 May; 6(21): eaay3823. PMID: 32494730.
Proper citation: RRID:WB-STRAIN:WBStrain00051962 Copy
http://www.wormbase.org/db/get?name=WBStrain00052018
Source Database: WormBase (WB)
Affected Genes: WBGene00002601(let-381)
Genomic Alteration: WBGene00002601(let-381)
Availability: unknown
Source References: PMID:34312566
Synonyms: let-381(dev205([mNeonGreen::let-381]) I; ujIs113 II.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at N-terminus of let-381 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052018 Copy
http://www.wormbase.org/db/get?name=WBStrain00051960
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: heIs12.
Notes: heIs12 [myo-3p::cyd-1 + myo-3p::cdk-4::Venus + myo-3p::GFP::H2B]. Expression of CYD-1, CDK-4::VENUS, and GFP::H2B in body wall muscles (BWM). Over-expression of tagged CYD-1 and tagged CDK-4 from integrated transgene causes incidental extra BWM nuclei. Expression levels are lower that those from heIs9 in SV857. Reference: Korzelius J, et al. PLoS Genet. 2011 Nov;7(11):e1002362. PMID: 22102824
Proper citation: RRID:WB-STRAIN:WBStrain00051960 Copy
http://www.wormbase.org/db/get?name=WBStrain00052014
Source Database: WormBase (WB)
Affected Genes: WBGene00016600(ets-5)
Genomic Alteration: WBGene00016600(ets-5)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; ets-5(dev200([ets-5::mNeonGreen]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of ets-5 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00052014 Copy
http://www.wormbase.org/db/get?name=WBStrain00051965
Source Database: WormBase (WB)
Affected Genes: WBGene00006743(unc-3)
Genomic Alteration: WBGene00006743(unc-3)
Availability: unknown
Source References: PMID:34312566
Synonyms: ujIs113 II; unc-3(ot837([unc-3::mNeonGreen::AID]) X.
Notes: Processed manually from the January AFP strain emails that failed parsing|"ujIs113 [pie-1p::mCherry::H2B::pie-1 3'UTR + nhr-2p::mCherry::his-24::let-858 3UTR + unc-119(+)] II. mNeonGreen knockin at C-terminus of unc-3 locus. Cellular protein expression pattern during embryogenesis (until bean stage) is available at URL: dulab.genetics.ac.cn/TF-atlas. Reference: Ma X, Zhao Z, Xiao L, et al. Nat Methods. 2021;18(8):893-902. doi:10.1038/s41592-021-01216-1."
Proper citation: RRID:WB-STRAIN:WBStrain00051965 Copy
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