Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00029616
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; otIs350.
Alternate IDs: WB-STRAIN:OH10684, CGC_OH10684
Notes: otIs350 [ric-4(fosmid)::SL2::NLS::YFP::H2B + pha-1(+)]. Pan-neuronal YFP expression. Reference: Stefanakis N., Carrera I., Hobert O. Neuron. 2015 Aug 19;87(4):733-50.
Proper citation: RRID:WB-STRAIN:WBStrain00029616 Copy
http://www.wormbase.org/db/get?name=WBStrain00029610
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otIs232.
Alternate IDs: WB-STRAIN:OH10434, CGC_OH10434
Notes: otIs232 [che-1p::mCherry(C. elegans-optimized)::che-1 3'UTR + rol-6(su1006)]. Rollers. mCherry expression in ASER and ASEL.
Proper citation: RRID:WB-STRAIN:WBStrain00029610 Copy
http://www.wormbase.org/db/get?name=WBStrain00029699
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otIs545; otIs593.
Alternate IDs: WB-STRAIN:OH12738, CGC_OH12738
Notes: Mutagen:Gamma rays|"otIs545 [gcy-5p::RFP + LacO repeats]. otIs593 [let-858p::GFP::LacI + ttx-3p::mCherry]. Maintain at 20C; otIs545 is very unstable at lower temperatures. RFP expression in ASER neuron. LACI::GFP aggregates on LacO repeats to form two dots in every nucleus. otIs545 is unstable, presumably due to the highly repetitive nature of the LacO array. Stock should be periodically examined for RFP expression and GFP localization to retain expression of the array. Reference: Patel T & Hobert O. eLife 2017."
Proper citation: RRID:WB-STRAIN:WBStrain00029699 Copy
http://www.wormbase.org/db/get?name=WBStrain00029612
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) otIs314 III; otEx4681.
Alternate IDs: WB-STRAIN:OH10535, CGC_OH10535
Notes: otIs314 [rab-3p(prom1)::2xNLS::TagRFP] III. otEx4681 [snn-1(fosmid)::SL2::NLS::YFP::H2B + pha-1(+)]. Maintain at 25C to select for otEx4681. Pan-neuronal nuclear YFP expression. Reference: Stefanakis N., Carrera I., Hobert O. Neuron. 2015 Aug 19;87(4):733-50.
Proper citation: RRID:WB-STRAIN:WBStrain00029612 Copy
http://www.wormbase.org/db/get?name=WBStrain00029613
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otIs341 X.
Alternate IDs: WB-STRAIN:OH10545, CGC_OH10545
Notes: otIs341 [mgl-1::GFP + pha-1(+)].
Proper citation: RRID:WB-STRAIN:WBStrain00029613 Copy
http://www.wormbase.org/db/get?name=WBStrain00029694
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otIs532.
Alternate IDs: WB-STRAIN:OH12541, CGC_OH12541
Notes: otIs532 [cho-1(fosmid)::SL2::NLS::YFP::H2B]. YFP expression in cholinergic neurons. Reference: Stefanakis N., Carrera I., Hobert O. Neuron. 2015 Aug 19;87(4):733-50.
Proper citation: RRID:WB-STRAIN:WBStrain00029694 Copy
http://www.wormbase.org/db/get?name=WBStrain00029695
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otIs534.
Alternate IDs: WB-STRAIN:OH12543, CGC_OH12543
Notes: otIs534 [cho-1(fosmid)::SL2::NLS::YFP::H2B]. YFP expression in cholinergic neurons. Reference: Stefanakis N., Carrera I., Hobert O. Neuron. 2015 Aug 19;87(4):733-50.
Proper citation: RRID:WB-STRAIN:WBStrain00029695 Copy
http://www.wormbase.org/db/get?name=WBStrain00029696
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx5765.
Alternate IDs: WB-STRAIN:OH12644, CGC_OH12644
Notes: otEx5765 [lin-14(fosmid)::GFP + ttx-3p::mCherry]. Pick mCherry+ animals to maintain. Fosmid-based lin-14 transcritpional reporter; see Li and Greenwald, Current Biology 2010, Oct 26;20(20):1875-9.|"otEx5765 [lin-14(fosmid)::GFP + ttx-3p::mCherry]. Pick mCherry+ animals to maintain. mCherry might be difficult to see at lower magnification. Fosmid-based lin-14 transcritpional reporter; see Li and Greenwald, Current Biology 2010, Oct 26;20(20):1875-9."
Proper citation: RRID:WB-STRAIN:WBStrain00029696 Copy
http://www.wormbase.org/db/get?name=WBStrain00029697
Source Database: WormBase (WB)
Affected Genes: WBGene00006818(unc-86)
Genomic Alteration: WBGene00006818(unc-86)
Availability: available
Source References: EMPTY
Synonyms: unc-86(n846) III; otEx5851.
Alternate IDs: WB-STRAIN:OH12734, CGC_OH12734
Notes: Made_by: Pat Gordon|"otEx5851 [unc-86(fosmid)::NLS::mChopti + lin-44::YFP]. Pick YFP+ to maintain."
Proper citation: RRID:WB-STRAIN:WBStrain00029697 Copy
http://www.wormbase.org/db/get?name=WBStrain00029608
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otIs334.
Alternate IDs: WB-STRAIN:OH10331, CGC_OH10331
Notes: otIs334 [sox-3(fosmid)::mCherry + rol-6(su1006)]. Rollers. Reference: Vidal B, et al. Development. 2015 Jul 15;142(14):2464-77.
Proper citation: RRID:WB-STRAIN:WBStrain00029608 Copy
http://www.wormbase.org/db/get?name=WBStrain00029603
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; otEx4557.
Alternate IDs: WB-STRAIN:OH10252, CGC_OH10252
Notes: otEx4557 [shn-1(fosmid)::SL2::NLS::YFP::H2B + rol-6(su1006)]. Rollers. Pick Rollers to maintain. Nuclear YFP expression in muscle. Reference: Stefanakis N., Carrera I., Hobert O. Neuron. 2015 Aug 19;87(4):733-50.
Proper citation: RRID:WB-STRAIN:WBStrain00029603 Copy
http://www.wormbase.org/db/get?name=WBStrain00029688
Source Database: WormBase (WB)
Affected Genes: WBGene00003106(mab-9)
Genomic Alteration: WBGene00003106(mab-9)
Availability: available
Source References: EMPTY
Synonyms: mab-9(ot788) II; hdIs1 X.
Alternate IDs: WB-STRAIN:OH12389, CGC_OH12389
Notes: hdIs1 [unc-53p::GFP + rol-6(su1006)] X. Rollers. De-repression of ectopic effector genes in DA/DB class motor neurons. Reference: Kerk SY, et al. Neuron 2017 (in press).
Proper citation: RRID:WB-STRAIN:WBStrain00029688 Copy
http://www.wormbase.org/db/get?name=WBStrain00029689
Source Database: WormBase (WB)
Availability: unknown
Source References: EMPTY
Synonyms: otIs502.
Alternate IDs: WB-STRAIN:OH12412
Notes: otIs502 [hlh-2(fosmid)::YFP + myo-3p::mCherry]. Broad embryonic expression; later in development transgene is expressed in DTCs, vulva, and some gland cells in pharynx. Reference: Masoudi N, et al. PLoS Biol. 2018 Apr 19;16(4):e2004979.
Proper citation: RRID:WB-STRAIN:WBStrain00029689 Copy
http://www.wormbase.org/db/get?name=WBStrain00029640
Source Database: WormBase (WB)
Availability: available
Source References: PMID:36712331
Synonyms: otIs376.
Alternate IDs: WB-STRAIN:OH10972, CGC_OH10972
Notes: otIs376 [eat-4(prom4)::GFP + rol-6(su1006)]. Rollers. Reference: Serrano-Saiz E, et al. Cell 2013. Oct; 155(3):659-73.
Proper citation: RRID:WB-STRAIN:WBStrain00029640 Copy
http://www.wormbase.org/db/get?name=WBStrain00029636
Source Database: WormBase (WB)
Affected Genes: WBGene00006743(unc-3)
Genomic Alteration: WBGene00006743(unc-3)
Availability: available
Source References: EMPTY
Synonyms: juIs14 IV; unc-3(e151) X; otEx4812.
Alternate IDs: WB-STRAIN:OH10851, CGC_OH10851
Notes: otEx4812 [unc-30p(2.6kb promoter)::unc-3(cDNA)::unc-54 3'UTR + myo-2::GFP]. juIs14 [acr-2p::GFP + lin-15(+)] Maintain by picking myo-2::GFP(+) animals. Reference: Kratsios P, et al. Nat Neurosci. 2011 Nov 27. doi: 10.1038/nn.2989.|"otEx4812 [unc-30p(2.6kb promoter)::unc-3(cDNA)::unc-54 3'UTR + myo-2::GFP]. juIs14 [acr-2p::GFP + lin-15(+)]. Maintain by picking myo-2::GFP(+) animals. Reference: Kratsios P, et al. Nat Neurosci. 2011 Nov 27. doi: 10.1038/nn.2989."
Proper citation: RRID:WB-STRAIN:WBStrain00029636 Copy
http://www.wormbase.org/db/get?name=WBStrain00029632
Source Database: WormBase (WB)
Affected Genes: WBGene00006743(unc-3)
Genomic Alteration: WBGene00006743(unc-3)
Availability: available
Source References: EMPTY
Synonyms: unc-3(e151) X; vsIs48; otEx4441.
Alternate IDs: WB-STRAIN:OH10819, CGC_OH10819
Notes: otEx4441 [hsp-16.2p::unc-3(cDNA) + ttx-3::mCherry]. vsIs48 [unc-17::GFP]. GFP expressed in all cholinergic neurons. Maintain by picking mCherry(+) animals. Reference: Kratsios P, et al. Nat Neurosci. 2011 Nov 27. doi: 10.1038/nn.2989.
Proper citation: RRID:WB-STRAIN:WBStrain00029632 Copy
http://www.wormbase.org/db/get?name=WBStrain00029630
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; otIs358.
Alternate IDs: WB-STRAIN:OH10765, CGC_OH10765
Notes: Made_by: Pat Gordon|"otIs358 [ser-2(prom2)::GFP + pha-1(+)]."
Proper citation: RRID:WB-STRAIN:WBStrain00029630 Copy
http://www.wormbase.org/db/get?name=WBStrain00029631
Source Database: WormBase (WB)
Availability: available
Source References: EMPTY
Synonyms: otEx4844.
Alternate IDs: WB-STRAIN:OH10799, CGC_OH10799
Notes: otEx4844 [acr-14p(300bp promoter)::DsRed2 + pha-1(+)]. Maintain by picking DsRed2(+) animals. Reference: Kratsios P, et al. Nat Neurosci. 2011 Nov 27. doi: 10.1038/nn.2989.
Proper citation: RRID:WB-STRAIN:WBStrain00029631 Copy
http://www.wormbase.org/db/get?name=WBStrain00029625
Source Database: WormBase (WB)
Affected Genes: WBGene00004010(pha-1)
Genomic Alteration: WBGene00004010(pha-1)
Availability: available
Source References: EMPTY
Synonyms: pha-1(e2123) III; otEx4805.
Alternate IDs: WB-STRAIN:OH10723, CGC_OH10723
Notes: otEx4805 [twk-40p(2.5kb promoter)::DsRed2 + pha-1(+)]. Maintain at 25C. Reference: Kratsios P, et al. Nat Neurosci. 2011 Nov 27. doi: 10.1038/nn.2989.
Proper citation: RRID:WB-STRAIN:WBStrain00029625 Copy
http://www.wormbase.org/db/get?name=WBStrain00029628
Source Database: WormBase (WB)
Affected Genes: WBGene00000561(cnd-1)
Genomic Alteration: WBGene00000561(cnd-1)
Availability: available
Source References: EMPTY
Synonyms: cnd-1(ot705) III; otIs341 X.
Alternate IDs: WB-STRAIN:OH10739, CGC_OH10739
Notes: otIs341 [mgl-1::GFP + pha-1(+)]. cnd-1(ot705) is L42=>F.
Proper citation: RRID:WB-STRAIN:WBStrain00029628 Copy
Can't find your Organism?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. If you want to find a specific organism, it's easier to enter an RRID or a Catalog Number to search. You can refine the search results using Facets on the left side of the search results page. If you are on the table view, you can also search in a specific column by clicking the column title and enter the keywords.
If you still could not find your organism in the search results, please help us by registering it into the system — it's easy. Organisms identifiers are registered through multiple sources depending on the species:
Welcome to the PRECISE-TBI Resources search. From here you can search through a compilation of resources used by PRECISE-TBI and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that PRECISE-TBI has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on PRECISE-TBI then you can log in from here to get additional features in PRECISE-TBI such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into PRECISE-TBI you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within PRECISE-TBI that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.