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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.

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Organism Name Proper Citation Species Synonyms Notes Phenotype Affected Gene Genomic Alteration Catalog Number Background Database Database Abbreviation Availability Source References Alternate IDs Record Last Update Mentions Count
SS.LEW-(D1Mco38-D1Rat49)/Jr
 
Resource Report
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RRID:RGD_728143 Rattus norvegicus Inbred Salt-sensitive SS/Jr rats were mated to LEW/NCrl rats to create congenic strain. 728143 congenic Rat Genome Database (RGD) RGD Unknown 728143 2026-07-25 12:42:33 0
F344.BN-(D3Mgh13-D3Mgh7)/Dlw
 
Resource Report
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RRID:RGD_728146 Rattus norvegicus This congenic strain carries the BN Edpm3 QTL along with many BN chromosome 3 markers on an F344 background. This strain is maintained at Oakland University, Rochester MN, USA 728146 congenic Rat Genome Database (RGD) RGD Unknown 728146 2026-07-25 12:42:33 0
SS.LEW-(D5Rat130-D5Rat108)/Jr
 
Resource Report
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RRID:RGD_728145 Rattus norvegicus S.LEW-D5Rat130/D5Mco10/Jr was selectively bred for 2 generation to fix the chromosome and then backcrossed with S strain 728145 congenic Rat Genome Database (RGD) RGD Unknown 728145 2026-07-25 12:42:33 0
SHR.WKY-(D1Wox34-D1Rat164)/Njs
 
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RRID:RGD_631589 Rattus norvegicus Congenic substrain derived by backcrossing congenic strain SHR.WKY-(D1Wox19-D1Wox34) to SHR 631589 congenic Rat Genome Database (RGD) RGD Unknown 631589 2026-07-25 12:42:33 0
SS.LEW-(D10Mco15-D10Mgh1)/Ayd
 
Resource Report
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RRID:RGD_728396 Rattus norvegicus A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. 728396 congenic Rat Genome Database (RGD) RGD Unknown 728396 2026-07-25 12:42:34 0
SS.LEW-(D10Rat55-D10Rat120)/Ayd
 
Resource Report
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RRID:RGD_728395 Rattus norvegicus A segment of chromosome 10 was transferred from LEW into the SS background. Two congenic strains, designated S.L4 and S.L5, that were previously shown to have trapped 2 BP QTLs, were used to derive congenic substrains. The F2 rats were genotyped for markers that resided in a region of interest. Each rat was then backcrossed to an SS rat to duplicate the fragment. 728395 congenic Rat Genome Database (RGD) RGD Unknown 728395 2026-07-25 12:42:34 0
SS.LEW-(D1Mco36-D1Rat49)/Jr
 
Resource Report
Resource Website
RRID:RGD_728159 Rattus norvegicus Inbred Salt-sensitive SS/Jr rats were mated to LEW/NCrlBR rats to create congenic strain. 728159 congenic Rat Genome Database (RGD) RGD Unknown 728159 2026-07-25 12:42:33 0
SS.LEW-(D5Rat130-D5Mit19)/Jr
 
Resource Report
Resource Website
RRID:RGD_728157 Rattus norvegicus SS.LEW-(D5Rat130-D5Mco10)/Jr was selectively bred for 2 generation to fix the chromosome and then backcrossed with SS strain 728157 congenic Rat Genome Database (RGD) RGD Unknown 728157 2026-07-25 12:42:33 0
SS.LEW-(D5Mco34-D5Mco10)/Jr
 
Resource Report
Resource Website
RRID:RGD_728156 Rattus norvegicus SS.LEW-(D5Rat130-D5Mco10)/Jr was selectively bred for 2 generation to fix the chromosome and then backcrossed with S strain 728156 congenic Rat Genome Database (RGD) RGD Unknown 728156 2026-07-25 12:42:33 0
DA.E3-(D20Wox3-D20Mgh4)/Rhd
 
Resource Report
Resource Website
RRID:RGD_737870 Rattus norvegicus A fragment containing MHC region was introduced in DA by marker-assisted breeding and verified as pure congenic line after six generations of backcross to DA. 737870 congenic Rat Genome Database (RGD) RGD Unknown 737870 2026-07-25 12:42:33 0
DA.E3-(D4Mit16-D4Mgh11)/Rhd
 
Resource Report
Resource Website
RRID:RGD_737872 Rattus norvegicus This congenic strain was obtained by the conventional backcross breeding to the parental DA strain with the negative selection of all known Pia QTLs and positive selection of microsatellite markers. 737872 congenic Rat Genome Database (RGD) RGD Unknown 737872 2026-07-25 12:42:33 0
DA.E3-(D12Got46-D12Rat26)/Rhd
 
Resource Report
Resource Website
RRID:RGD_737871 Rattus norvegicus This congenic strain was obtained by the conventional backcross breeding to the parental DA strain with the negative selection of all known Pia QTLs and positive selection of microsatellite markers. 737871 congenic Rat Genome Database (RGD) RGD Unknown 737871 2026-07-25 12:42:33 0
DA.E3-(D20Rat47-AA858870)/Rhd
 
Resource Report
Resource Website
RRID:RGD_10002745 Rattus norvegicus A fragment containing MHC region from E3/ZtmRhd was introduced in DA/ZtmRhd by marker-assisted breeding and verified as pure congenic line after six generations of backcross to DA/ZtmRhd. 10002745 congenic Rat Genome Database (RGD) RGD Unknown 10002745 2026-07-25 12:42:33 0
SS.LEW-(D10Rat11-D10Mgh1)/Ayd
 
Resource Report
Resource Website
RRID:RGD_728140 Rattus norvegicus Strains SS/Jr and LEW were bred for F1 then backcrossed to S to give BC1, this was backcrossed to S to give BC2 and so on till BC5, BC5 was crossed to S to duplicate the recombinant segment 728140 congenic Rat Genome Database (RGD) RGD Unknown 728140 2026-07-25 12:42:33 0
DA.PVG.1AV1-(D4Rat63-D4Rat203)
 
Resource Report
Resource Website
RRID:RGD_737861 Rattus norvegicus Congenic substrain derived from marker assisted selection for PVG.1AV1 chromsome 4 alleles on the DA recipient strain. 737861 congenic Rat Genome Database (RGD) RGD Unknown 737861 2026-07-25 12:42:33 0
F344.GK-(D1Mgh10-D1Rat90)/Swe
 
Resource Report
Resource Website
RRID:RGD_631846 Rattus norvegicus Congenic strain originated from an inbred F344/Mcwi strain 631846 congenic Rat Genome Database (RGD) RGD Unknown 631846 2026-07-25 12:42:34 0
WKY.SHRSP-(D1Wox18-D1Rat44)/Izm
 
Resource Report
Resource Website
RRID:RGD_1302692 Rattus norvegicus The desired fragment is transferred from SHRSP to WKY. National BioResource Project for the Rat in Japan 1302692 congenic Rat Genome Database (RGD) RGD Cryopreserved Embryo 1302692 2026-07-25 12:42:34 0
BN.LEW-(D10Rat72-D10Arb4)/Rj
 
Resource Report
Resource Website
RRID:RGD_1331832 Rattus norvegicus This congenic strain was derived from female LEW rats and male BN rats obtained from the Janvier breeding center, Le Genest-Saint-Isle, France. F1 offsprings were crossed with BN males to transfer the desired locus to BN background. 1331832 congenic Rat Genome Database (RGD) RGD Unknown 1331832 2026-07-25 12:42:34 0
LEW.1AV1.DA-(D10Rat92-D10Rat135)/Ubc
 
Resource Report
Resource Website
RRID:RGD_631595 Rattus norvegicus LEW.1AV1 x DA F1 was backcrossed to LEW.1AV1 for 9 generations with selection for the Oia3 locus using flanking markers, then F1N9F1 rats were used as founders for the Oia3 congenic strain. 631595 congenic Rat Genome Database (RGD) RGD Unknown 631595 2026-07-25 12:42:34 0
OLETF.F344-(D1Rat169-D1Rat459)/Got
 
Resource Report
Resource Website
RRID:RGD_734527 Rattus norvegicus Female OLETF/Got rats were crossed with F344/DuCrlCrlj rats. The F1 were backcrossed to OLETF to produce the BC1. Selective males from BC1 were backcrossed to OLETF to produce successive congenic generations. 734527 congenic Rat Genome Database (RGD) RGD Unknown 734527 2026-07-25 12:42:35 0

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