Searching the RRID Resource Information Network
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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00051621
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003275(mir-47)|WBGene00003514(myo-2)|WBGene00005016(sqt-1)
Genomic Alteration: WBGene00003275(mir-47), WBGene00003514(myo-2), WBGene00005016(sqt-1)
Availability: unknown
References:
Synonyms: mir-47(umn55[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR LoX511I + Lox2272])I.
Alternate IDs:
Notes: mir-47 pre-miRNA deletion allele in which mir-47 pre-miRNA was replaced by myo-2p::wrmScarlet. Rollers. Generated in parental strain N2. [NOTE: Low levels of Cre activity can lead to excision of the SEC, causing the strain to lose the Roll phentoype. Pick Rollers to retain full transgene cassette.]
Proper citation: RRID:WB-STRAIN:WBStrain00051621 Copy
http://www.wormbase.org/db/get?name=WBStrain00051587
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: bqSi294 II; bqSi852 IV.
Alternate IDs:
Notes: bqSi294 [hsp16.41p::FRT::mCherry::his-58::FRT::GFP::his-58 + unc-119(+)] II. bqSi852 [ckb-3p::FLP::SL2::mNG + unc-119(+)] IV. Heat shock induces nuclear GFP expression in the somatic gonad and nuclear mCherry expression elsewhere. Constitutive expression of diffusible mNeonGreen in the somatic gonad can mask GFP::HIS-58 signal. Might carry unc-119(ed3) or unc-119(ed9) III. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051587 Copy
http://www.wormbase.org/db/get?name=WBStrain00051620
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003514(myo-2)|WBGene00005016(sqt-1)|WBGene00077715(mir-1818)
Genomic Alteration: WBGene00003514(myo-2), WBGene00005016(sqt-1), WBGene00077715(mir-1818)
Availability: unknown
References:
Synonyms: mir-1818(umn54[lox2272 myo-2p::wrmScarlet + lox511I sqt-1(d) hsp::CRE HygR LoX511I + Lox2272])I.
Alternate IDs:
Notes: mir-1818 pre-miRNA deletion allele in which mir-1818 pre-miRNA was replaced by myo-2p::wrmScarlet. Rollers. Generated in parental strain N2. [NOTE: Low levels of Cre activity can lead to excision of the SEC, causing the strain to lose the Roll phentoype. Pick Rollers to retain full transgene cassette.]
Proper citation: RRID:WB-STRAIN:WBStrain00051620 Copy
http://www.wormbase.org/db/get?name=WBStrain00051586
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003210(mel-28)
Genomic Alteration: WBGene00003210(mel-28)
Availability: unknown
References:
Synonyms: bqSi189 II; mel-28(bq17 [g>f>p::mel-28]) III.
Alternate IDs:
Notes: bqSi189 [lmn-1p::mCherry::his-58 + unc-119(+)] II. Cassette for GFP-labeling and FLP-mediated inactivation of endogenous mel-28 inserted by CRISPR/Cas9 after the mel-28 start codon. FRT sites in GFP introns 2 & 3 are indicated by > symbols in genotype. Ubiquitous expression of mCherry::HIS-58. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051586 Copy
http://www.wormbase.org/db/get?name=WBStrain00051625
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00002957(let-858)|WBGene00003039(mir-48)
Genomic Alteration: WBGene00002957(let-858), WBGene00003039(mir-48)
Availability: unknown
References:
Synonyms: mir-48(umn59[mir-48p+SL1::EGL-13NLS::mScarlet-I::cMycNLS::Lox511I::let-858 3'UTR]) V.
Alternate IDs:
Notes: Made_by: Julie Knott & Marcus Vargas|"Nuclear mScarlet-I was inserted in place of the endogenous mir-48 pre-miRNA via CRISPR/CAS9. Left Flanking: CACAGGTAAGTCAATTAACCAATTG, Right Flanking: TTATTATTATGTTTCATTCAATAAC. sgRNA: GGGAATGCGAGCTAGGCTGG."
Proper citation: RRID:WB-STRAIN:WBStrain00051625 Copy
http://www.wormbase.org/db/get?name=WBStrain00051589
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: bqSi294 II; bqSi1021 IV.
Alternate IDs:
Notes: bqSi294 [hsp16.41p::FRT::mCherry::his-58::FRT::GFP::his-58 + unc-119(+)] II; bqSi1021 [lin-31p::FLP::SL2::mNG + unc-119(+)] IV. Heat shock induces nuclear GFP expression in P1.p-P11.p and nuclear mCherry expression elsewhere. Constitutive expression of diffusible mNeonGreen in P1.p-P11.p can mask GFP::HIS-58 signal. May carry unc-119(ed3) or unc-119(ed9) III. Reference: Fragoso-Luna A, et al. 2021 bioRxiv 2021.12.21.473632; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051589 Copy
http://www.wormbase.org/db/get?name=WBStrain00051570
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009073(delm-1)|WBGene00016063(delm-2)|WBGene00016064(acd-1)
Genomic Alteration: WBGene00009073(delm-1), WBGene00016063(delm-2), WBGene00016064(acd-1)
Availability: unknown
References:
Synonyms: acd-1(sta6) delm-2(ok1822) I; delm-1(ok1266) IV.
Alternate IDs:
Notes: acd-1 and delm-2 are tandem paralogs. This double mutant was created by CRISPR-engineered deletion of acd-1 in a delm-2(ok1822) background (parental strain RB1523). acd-1(sta6) is predicted to be a null allele (~200bp indel causing frameshift in exon 4). This triple mutant strain was made by crossing the acd-1(sta6) delm-2(ok1822) double mutant with delm-1(ok1226) parental strain RB1177.|"Made_by: Lauren Booth"
Proper citation: RRID:WB-STRAIN:WBStrain00051570 Copy
http://www.wormbase.org/db/get?name=WBStrain00051614
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
References:
Synonyms: unc-119(ed3) III; kstSi37 IV; kstEx46.
Alternate IDs:
Notes: kstSi37 [Cbr-unc-119(kst13)] IV. kstEx46 [hsp-16.41p::Cas9::gpd-2::TagRFP-T::smu-1 3'UTR + mlc-1p::mCherry + NeoR]. Pick mCherry+ to maintain. Unc. Cbr-unc-119(kst13) is a partial unc-119 used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051614 Copy
http://www.wormbase.org/db/get?name=WBStrain00051612
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
References:
Synonyms: kstSi84 I; unc-119(ed3) III.
Alternate IDs:
Notes: kstSi84 [LoxP + Cbr-unc-119(+) + LoxP + mlc-2p::GFP(kst32)] I. N2-like, no MLC-2::GFP fluorescence. mlc-2p::GFP(kst32) is a partial, non-functional GFP reporter used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Cbr-unc-119(+) is flanked by LoxP sites, facilitating removal by recombination. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051612 Copy
http://www.wormbase.org/db/get?name=WBStrain00051578
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001569(meg-3)|WBGene00016485(meg-4)
Genomic Alteration: WBGene00001569(meg-3), WBGene00016485(meg-4)
Availability: unknown
References:
Synonyms: mjIs134 II; meg-3(tm4259) meg-4(ax2026) X.
Alternate IDs:
Notes: Made_by: Itai Toker|"mjIs134 [mex-5p::GFP::(Gly)5Ala::his-58::tbb-2 3'UTR + Cbr-unc-119(+)] II. Germ granule defective. ~30% sterility, maintain by picking gravid adults with visible embryos. Nuclear GFP expression in the germline. Reference: Lev I, et al. Curr Biol. 2019 Sep 9;29(17):2880-2891.e4. PMID: 31378614"
Proper citation: RRID:WB-STRAIN:WBStrain00051578 Copy
http://www.wormbase.org/db/get?name=WBStrain00051611
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
References:
Synonyms: kstSi61 II; unc-119(ed3) III.
Alternate IDs:
Notes: kstSi61 [LoxP + Cbr-unc-119(+) + LoxP + hygroR(kst31)] II. N2-like, no hygromycin resistance (HygroR). hygroR(kst31) is a partial, non-functional hygromycin-resistance construct used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Cbr-unc-119(+) is flanked by LoxP sites, facilitating removal by recombination. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051611 Copy
http://www.wormbase.org/db/get?name=WBStrain00051617
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001182(egl-13)|WBGene00002957(let-858)|WBGene00003335(mir-241)
Genomic Alteration: WBGene00001182(egl-13), WBGene00002957(let-858), WBGene00003335(mir-241)
Availability: unknown
References:
Synonyms: mir-241(umn47[mir-241p+SL1::egl-13-NLS::mScarlet-I::c-myc-NLS::linker::mODC(422-461)(E428A/E430A/E431A)::let-858 3' UTR]) V.
Alternate IDs:
Notes: Made_by: Marcus Vargas & Julie Knott|"Nuclear mScarlet-I fused to a PEST was inserted in place of the endogenous mir-241 pre-miRNA via CRISPR/CAS9. Left Flanking: CTATTTTTTTCACTTGGATTAGGGG, Right Flanking: GGGATGCTCTTTTTGTACCAAACCG. sgRNA: CCTCAACTTTGACACCCCCG."
Proper citation: RRID:WB-STRAIN:WBStrain00051617 Copy
http://www.wormbase.org/db/get?name=WBStrain00051561
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004143(pqn-59)
Genomic Alteration: WBGene00004143(pqn-59)
Availability: unknown
References:
Synonyms: pqn-59::ollas::STOP(cz2)
Alternate IDs:
Notes: Batch Strain object requested via get_NS_ids.pl
Proper citation: RRID:WB-STRAIN:WBStrain00051561 Copy
http://www.wormbase.org/db/get?name=WBStrain00051566
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: ldIs7[skn-1b/c::GFP; rol-6(su1006)]
Alternate IDs:
Notes: [2022-05-02T21:36:56.545Z WBPerson712] New Strain: lsIs7[skn-1b/c::GFP + rol-6(su1006)]|"[2022-05-02T21:39:29.432Z WBPerson712] Kill Strain: typo in genotype"|"[2022-05-02T21:40:28.377Z WBPerson712] Ressurect Strain: yes, genotype should be ldIs7[skn-1b/c::GFP; rol-6(su1006)]"
Proper citation: RRID:WB-STRAIN:WBStrain00051566 Copy
http://www.wormbase.org/db/get?name=WBStrain00051565
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: (Pdat-1::GFP; Pdat-1::alpha-synuclein)
Alternate IDs:
Notes: [2022-04-21T22:26:42.385Z WBPerson324] New Strain: WBPaper00061894; Genotype: (Pdat-1::GFP; Pdat-1::alpha-synuclein)
Proper citation: RRID:WB-STRAIN:WBStrain00051565 Copy
http://www.wormbase.org/db/get?name=WBStrain00051563
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001072(dpy-10)|WBGene00032386(Cbr-dpy-10)
Genomic Alteration: WBGene00001072(dpy-10), WBGene00032386(Cbr-dpy-10)
Availability: unknown
References:
Synonyms: Cbr-dpy-10(ot1210) II.
Alternate IDs:
Notes: Dpy Rol. Heterozygotes are Left-handed Rol. R92C mutation in Cbr-dpy-10 generated via CRISPR/Cas9. Homologous to the C. elegans dpy-10(cn64) mutation.|"Made_by: Itai Toker"|"[2022-04-14T16:23:26.123Z WBPerson712] New Strain: 10.17912/micropub.biology.000554. Cbr-dpy-10(ot1210) II"
Proper citation: RRID:WB-STRAIN:WBStrain00051563 Copy
http://www.wormbase.org/db/get?name=WBStrain00051567
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: EMPTY
Alternate IDs:
Notes: [2022-05-05T15:26:01.821Z WBPerson712] New Strain: WBPaper00064018 Caenorhabditis elegans fog-2(q71) Generated through introgression of fog-2(q71) mutation from JK574 strain to N2 genetic background. Available at the Jagiellonian University, Institute of Environmental Sciences
Proper citation: RRID:WB-STRAIN:WBStrain00051567 Copy
http://www.wormbase.org/db/get?name=WBStrain00051600
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00000099(air-2)
Genomic Alteration: WBGene00000099(air-2)
Availability: unknown
References:
Synonyms: air-2(ie31[degron::GFP::air-2]) I.
Alternate IDs:
Notes: Degron and GFP tag inserted into endogenous air-2 gene locus by CRISPR/Cas9 engineering. Reference: Divekar NS, et al. PLoS Genet. 2021 May 20;17(5):e1009567. PMID: 34014923|"GFP::AIR-2 endogenous tag"
Proper citation: RRID:WB-STRAIN:WBStrain00051600 Copy
http://www.wormbase.org/db/get?name=WBStrain00051606
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00001423(fib-1)|WBGene00001598(glh-1)
Genomic Alteration: WBGene00001423(fib-1), WBGene00001598(glh-1)
Availability: unknown
References:
Synonyms: glh-1(sam140[glh-1::T2A::wrmScarlet(1-10)]) I; fib-1(mu498[wrmScarlet11::fib-1]) V.
Alternate IDs:
Notes: fib-1(mu498[wrmScarlet11::fib-1]) generated via CRISPR/Cas9 insertion into parental strain DUP237; transgene contains a linker between wrmScarlet11 and fib-1. Endogenous fib-1 detectable in the germline. T2A::wrmScarlet(1-10) fused to the C-terminus of endogenous GLH-1. The T2A self-cleaving peptide separates wrmScarlet(1-10) from GLH-1 post-translationally so that wrmScarlet(1-10) disperses throughout germ cell nuclei and cytoplasm. wrmScarlet(1-10) is also maternally loaded into embryos, where it persists through early and mid-embryonic development. Reference: Goudeau J, et al. bioRxiv 2020.07.02.185249; doi: https:
Proper citation: RRID:WB-STRAIN:WBStrain00051606 Copy
http://www.wormbase.org/db/get?name=WBStrain00051608
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00006843(unc-119)
Genomic Alteration: WBGene00006843(unc-119)
Availability: unknown
References:
Synonyms: kstSi32 I; unc-119(ed3) III.
Alternate IDs:
Notes: kstSi32 [Cbr-unc-119(kst13)] I. Unc. Cbr-unc-119(kst13) is a partial unc-119 used for section in MosTI, an updated technique for targeted single-copy and extra-chromosomal array insertion. Reference: El Mouridi S, et al. 2022.
Proper citation: RRID:WB-STRAIN:WBStrain00051608 Copy
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