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Integrated Animals is a virtual database currently indexing available animal strains and mutants from: AGSC (Ambystoma), BCBC (mice), BDSC (flies), European Xenopus Resource Center (frog), The National Xenopus Resource (frog), Xenopus Express (frog), CWRU Cystic Fibrosis Mouse Models (mice), DGGR (flies), FlyBase (flies), IMSR (mice), MGI (mice), MMRRC (mice), NSRRC (pig), RGD (rats), Sperm Stem Cell Libraries for Biological Research (rats), Tetrahymena Stock Center (Tetrahymena), WormBase (worms), XGSC (Xiphophorus), ZFIN (zebrafish), and ZIRC (zebrafish). Note, the IMSR data is linked, but users may need to re-execute the search if the top mouse is not returned properly.
Note: BCBC is no longer in service, so the links may not be functional.
http://www.wormbase.org/db/get?name=WBStrain00031196
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:QG2810
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00031196 Copy
http://www.wormbase.org/db/get?name=WBStrain00031119
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00007732(spe-44)
Genomic Alteration: WBGene00007732(spe-44)
Availability: available
References:
Synonyms: fxIs1 I; spe-44(fx110[spe-44::degron]) IV.
Alternate IDs: WB-STRAIN:PX627, CGC_PX627
Notes: fxIs1 [pie-1p::TIR1::mRuby, I:2851009] I. Auxin-inducible spermatogenesis arrest, resulting in hermaphrodite self-sterility. Degron tag was inserted into the endogenous spe-44 locus. Reference: Kasimatis KR, et al. (2018) Auxin-Mediated Sterility Induction System for Longevity and Mating Studies in Caenorhabditis elegans. BioRvix. doi: https:|"Made_by: Katja Kasimatis and Megan Moerdyk-Schauwecker"|"Reference WBPaper00056998 added based on published strain data identified by Textpresso literature search."|"WBStrain mapped, WBPaper00061547 added based on AFP_Strain data."|"WBStrain mapped, WBPaper00061579 added based on AFP_Strain data."|"WBStrain provided so WBPaper00059799 paper added based on AFP_Strain data."|"WBStrain provided so WBPaper00060545 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00031119 Copy
http://www.wormbase.org/db/get?name=WBStrain00031116
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: available
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:PX179, CGC_PX179
Notes: Isolated in northwest Hendricks Park, northwest rhododendron garden, Eugene, OR. From under rocks over damp, organic soil. Isolated from a snail.|"Made_by: Ben White"
Proper citation: RRID:WB-STRAIN:WBStrain00031116 Copy
http://www.wormbase.org/db/get?name=WBStrain00031201
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:QG2823
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00031201 Copy
http://www.wormbase.org/db/get?name=WBStrain00031200
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: Caenorhabditis elegans wild isolate.
Alternate IDs: WB-STRAIN:QG2818
Notes: Added Wild_Isolate tag as Isolation information is available suggesting that they were sampled from the wild.
Proper citation: RRID:WB-STRAIN:WBStrain00031200 Copy
http://www.wormbase.org/db/get?name=WBStrain00031166
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003639(nhr-49)|WBGene00021313(paqr-2)
Genomic Alteration: WBGene00003639(nhr-49), WBGene00021313(paqr-2)
Availability: available
References:
Synonyms: nhr-49(et7) I; paqr-2(tm3410) III.
Alternate IDs: WB-STRAIN:QC120, CGC_QC120
Notes: paqr-2(tm3410) homozygotes are unable to grow at 15C and exhibit a withered tail tip phenotype at 20C and 25C. nhr-49(et7) is a gain-of-function allele and suppresses the cold-adaptation defect and tail-tip defects of paqr-2(tm3410) mutants. nhr-49(et7); paqr-2(tm3410) double mutants can be propagated at 15C and have a weak tail tip defect. Reference: Svensk E, et al. PLoS Genet. 2013 Sep;9(9):e1003801.
Proper citation: RRID:WB-STRAIN:WBStrain00031166 Copy
http://www.wormbase.org/db/get?name=WBStrain00031164
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00013878(atfs-1)
Genomic Alteration: WBGene00013878(atfs-1)
Availability: available
References:
Synonyms: atfs-1(et18) V.
Alternate IDs: WB-STRAIN:QC118, CGC_QC118
Notes: Gain-of-function atfs-1 allele. Reference: Rauthan M, et al. Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):5981-6.|"WBStrain provided so WBPaper00061178 paper added based on AFP_Strain data."
Proper citation: RRID:WB-STRAIN:WBStrain00031164 Copy
http://www.wormbase.org/db/get?name=WBStrain00031163
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00013878(atfs-1)
Genomic Alteration: WBGene00013878(atfs-1)
Availability: available
References:
Synonyms: atfs-1(et17) V.
Alternate IDs: WB-STRAIN:QC117, CGC_QC117
Notes: Gain-of-function atfs-1 allele. Reference: Rauthan M, et al. Proc Natl Acad Sci U S A. 2013 Apr 9;110(15):5981-6.
Proper citation: RRID:WB-STRAIN:WBStrain00031163 Copy
http://www.wormbase.org/db/get?name=WBStrain00031170
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00009057(cept-1)|WBGene00021313(paqr-2)
Genomic Alteration: WBGene00009057(cept-1), WBGene00021313(paqr-2)
Availability: available
References:
Synonyms: paqr-2(tm3410) III; cept-1(et11) X.
Alternate IDs: WB-STRAIN:QC124, CGC_QC124
Notes: paqr-2(tm3410) homozygotes are unable to grow at 15C and exhibit a withered tail tip phenotype at 20C and 25C. cept-1(et11) suppresses the cold-adaptation defect and tail-tip defects of paqr-2(tm3410) mutants. paqr-2(tm3410); cept-1(et11) double mutants can be propagated at 15C and have a weak tail tip defect. Reference: Svensk E, et al. PLoS Genet. 2013 Sep;9(9):e1003801.
Proper citation: RRID:WB-STRAIN:WBStrain00031170 Copy
http://www.wormbase.org/db/get?name=WBStrain00031178
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00012376(nduf-7)
Genomic Alteration: WBGene00012376(nduf-7)
Availability: available
References:
Synonyms: nduf-7(et19) I.
Alternate IDs: WB-STRAIN:QC134, CGC_QC134
Notes: Constitutively activated mitochondrial UPR and an extended lifespan. Reference: Rauthan M, et al. G3 (Bethesda). 2015 Jun 1. pii: g3.115.018598.|"Made_by: M Rauthan & M Pilon"
Proper citation: RRID:WB-STRAIN:WBStrain00031178 Copy
http://www.wormbase.org/db/get?name=WBStrain00031177
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003242(mig-6)
Genomic Alteration: WBGene00003242(mig-6)
Availability: available
References:
Synonyms: mig-6(sa580) V.
Alternate IDs: WB-STRAIN:QC133, CGC_QC133
Notes: Made_by: M Rauthan & M Pilon|"sa580 is a G-to-A transition that changes a glycine at position 965 to a glutamate in MIG-6. Reference: Jafari M, et al. (2010) Genetics 186:969-982."
Proper citation: RRID:WB-STRAIN:WBStrain00031177 Copy
http://www.wormbase.org/db/get?name=WBStrain00031175
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00021313(paqr-2)
Genomic Alteration: WBGene00021313(paqr-2)
Availability: available
References:
Synonyms: paqr-2(tm3410) III.
Alternate IDs: WB-STRAIN:QC129, CGC_QC129
Notes: Mutagen:TMP+UV|"Mutagen:TMP/UV"|"Small brood size, reduced adult length, reduced locomotion and reduced life span. Maintain at 25C. Unable to grow at 15C. Withered tail-tip phenotype at 20C and 25C. Reference: Svensson E, et al. PLoS One. 2011;6(6):e21343."
Proper citation: RRID:WB-STRAIN:WBStrain00031175 Copy
http://www.wormbase.org/db/get?name=WBStrain00031173
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00007016(mdt-15)|WBGene00021313(paqr-2)
Genomic Alteration: WBGene00007016(mdt-15), WBGene00021313(paqr-2)
Availability: available
References:
Synonyms: mdt-15(et14) I; paqr-2(tm3410) III.
Alternate IDs: WB-STRAIN:QC127, CGC_QC127
Notes: paqr-2(tm3410) homozygotes are unable to grow at 15C and exhibit a withered tail tip phenotype at 20C and 25C. mdt-15(et14) is a gain-of-function allele and suppresses the cold-adaptation defect and tail-tip defects of paqr-2(tm3410) mutants. mdt-15(et14); paqr-2(tm3410) double mutants can be propagated at 15C and have a weak tail tip defect. Reference: Svensk E, et al. PLoS Genet. 2013 Sep;9(9):e1003801.
Proper citation: RRID:WB-STRAIN:WBStrain00031173 Copy
http://www.wormbase.org/db/get?name=WBStrain00031172
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003639(nhr-49)|WBGene00021313(paqr-2)
Genomic Alteration: WBGene00003639(nhr-49), WBGene00021313(paqr-2)
Availability: available
References:
Synonyms: nhr-49(et13) I; paqr-2(tm3410) III.
Alternate IDs: WB-STRAIN:QC126, CGC_QC126
Notes: paqr-2(tm3410) homozygotes are unable to grow at 15C and exhibit a withered tail tip phenotype at 20C and 25C. nhr-49(et13) is a gain-of-function allele and suppresses the cold-adaptation defect and tail-tip defects of paqr-2(tm3410) mutants. nhr-49(et13); paqr-2(tm3410) double mutants can be propagated at 15C and have a weak tail tip defect. Reference: Svensk E, et al. PLoS Genet. 2013 Sep;9(9):e1003801.
Proper citation: RRID:WB-STRAIN:WBStrain00031172 Copy
http://www.wormbase.org/db/get?name=WBStrain00031145
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:PY8302
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00031145 Copy
http://www.wormbase.org/db/get?name=WBStrain00031147
Source Database: WormBase (WB)
Genetic Background:
Affected Genes:
Genomic Alteration:
Availability: unknown
References:
Synonyms: EMPTY
Alternate IDs: WB-STRAIN:PY8304
Notes: EMPTY
Proper citation: RRID:WB-STRAIN:WBStrain00031147 Copy
http://www.wormbase.org/db/get?name=WBStrain00031156
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003380(mnm-2)|WBGene00004368(ric-19)
Genomic Alteration: WBGene00003380(mnm-2), WBGene00004368(ric-19)
Availability: available
References:
Synonyms: etIs2 III; mnm-2(et2) X.
Alternate IDs: WB-STRAIN:QC102, CGC_QC102
Notes: etIs1 [ric-19p::ric-19::GFP + rol-6(su1006). Low levels of ric19::GFP fusion protein expression driven by the ric-19 promoter in all neurons except for strong expression in the pharyngeal M2 neurons. Nearly 90% of worms have defects in the distal ends of the pharyngeal M2 neurons.
Proper citation: RRID:WB-STRAIN:WBStrain00031156 Copy
http://www.wormbase.org/db/get?name=WBStrain00031153
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004368(ric-19)
Genomic Alteration: WBGene00004368(ric-19)
Availability: available
References:
Synonyms: etIs2 III.
Alternate IDs: WB-STRAIN:QC47, CGC_QC47
Notes: etIs1 [ric-19p::ric-19::GFP + rol-6(su1006). Low levels of ric19::GFP fusion protein expression driven by the ric-19 promoter in all neurons except for strong expression in the pharyngeal M2 neurons.|"Mutagen:Gamma Rays"
Proper citation: RRID:WB-STRAIN:WBStrain00031153 Copy
http://www.wormbase.org/db/get?name=WBStrain00031152
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00004368(ric-19)
Genomic Alteration: WBGene00004368(ric-19)
Availability: available
References:
Synonyms: etIs1 IV.
Alternate IDs: WB-STRAIN:QC5, CGC_QC5
Notes: etIs1 [ric-19p::ric-19::GFP + rol-6(su1006). Low levels of ric19::GFP fusion protein expression driven by the ric-19 promoter in all neurons except for strong expression in the pharyngeal M2 neurons.|"Mutagen:Gamma Rays"
Proper citation: RRID:WB-STRAIN:WBStrain00031152 Copy
http://www.wormbase.org/db/get?name=WBStrain00031158
Source Database: WormBase (WB)
Genetic Background:
Affected Genes: WBGene00003242(mig-6)|WBGene00004368(ric-19)
Genomic Alteration: WBGene00003242(mig-6), WBGene00004368(ric-19)
Availability: available
References:
Synonyms: etIs2 III; mig-6(et4) V.
Alternate IDs: WB-STRAIN:QC104, CGC_QC104
Notes: etIs1 [ric-19p::ric-19::GFP + rol-6(su1006). Low levels of ric19::GFP fusion protein expression driven by the ric-19 promoter in all neurons except for strong expression in the pharyngeal M2 neurons. 100% of worms have a twisted pharynx, which is easily seen as a twisted appearance of the M3 neurons.
Proper citation: RRID:WB-STRAIN:WBStrain00031158 Copy
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