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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Institute of Molecular and Cell Biology; Singapore; Singapore Resource Report Resource Website |
Institute of Molecular and Cell Biology; Singapore; Singapore (RRID:SCR_012775) | IMCB | institution | The Institute of Molecular and Cell Biology (IMCB) was established in 1987 at the National University of Singapore (NUS) before becoming an autonomous research institute (RI) of A*STAR. Its mission is to develop and foster a vibrant research culture for cutting-edge basic biomedical sciences and for training high-quality Ph.D. students for the flourishing biotechnology and pharmaceutical industries in Singapore. Funded primarily by the Biomedical Research Council (BMRC) of A*STAR, IMCB now boasts about 30 core research labs and 8 core facility units consisting of over 300 research scientists in total. IMCB''s research activities focus on six major fields: Cell Biology, Developmental Biology, Structural Biology, Infectious Diseases, Cancer Biology and Translational Research with core strengths in cell cycling, cell signalling, cell death, cell motility and protein trafficking. IMCB continues to strive for excellence in biomedical R&D to see the vision of Singapore being a world class hub for the Biomedical Sciences in Asia and beyond. IMCB''s achievements include being part of the international consortium that successfully sequenced the entire pufferfish (Fugu rubripes) in 2002. IMCB was awarded the Nikkei Prize 2000 for Technological Innovation in recognition of its growth into a leading international research centre and its collaboration with industry and research institutes worldwide. IMCB continues to publish in renowned international journals, with more than 1300 publications to its credit since 1987. |
has parent organization: Agency for Science Technology and Research is parent organization of: Fugu Genome Project is parent organization of: Elephant shark genome sequencing is parent organization of: Japanese Lamprey Genome Project |
grid.418812.6, Crossref funder ID: 501100007674, ISNI: 0000 0004 0620 9243, Wikidata: Q16999819, nlx_91982 | https://ror.org/04xpsrn94 | SCR_012775 | 2026-07-25 12:07:36 | 0 | |||||||||
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tRanslatome Resource Report Resource Website 1+ mentions |
tRanslatome (RRID:SCR_012810) | tRanslatome | software resource | Detection of differentially expressed genes (DEGs) from the comparison of two biological conditions among different levels of gene expression, using several statistical methods: Rank Product, t-test, SAM, Limma, ANOTA, DESeq, edgeR. |
is listed by: OMICtools has parent organization: Bioconductor |
PMID:24222209 | Free | OMICS_01316 | SCR_012810 | tRanslatome - Comparison between multiple levels of gene expression | 2026-07-25 12:07:41 | 2 | |||||||
|
Krona Resource Report Resource Website 50+ mentions |
Krona (RRID:SCR_012785) | Krona | software resource | Software that allows hierarchical data to be explored with zoomable pie charts. | bio.tools |
is listed by: bio.tools has parent organization: SourceForge |
PMID:21961884 | OMICS_01498, biotools:krona | https://bio.tools/krona | SCR_012785 | Krona - Hierarchical data browser | 2026-07-25 12:07:36 | 89 | ||||||
|
U.S. Social Security Administration Resource Report Resource Website 1+ mentions |
U.S. Social Security Administration (RRID:SCR_012905) | SSA | institution | Independent agency of the U.S. federal government that administers Social Security, a social insurance program consisting of retirement, disability, and survivor benefits. | Government granting agency | is parent organization of: New Beneficiary Data System | Crossref funder ID: 100005225, ISNI: 0000 0001 0726 0196, nlx_151831, grid.453277.0, Wikidata: Q2824618 | https://ror.org/04b7xxn32 | SCR_012905 | Social Security Administration, Social Security Administration (SSA) | 2026-07-25 12:07:39 | 6 | |||||||
|
Meharry Medical College Resource Report Resource Website |
Meharry Medical College (RRID:SCR_012863) | MMC | university | Founded in 1876, Meharry is a non-profit university in Tennessee. Meharry includes a medical school, dental school, and a graduate school. | undergraduate, graduate, master's, doctoral, phD, institution, university |
is related to: Clinical and Translational Science Awards Consortium is parent organization of: Meharry Endocrine core is parent organization of: Meharry Flow Cytometry and BSL3 Core is parent organization of: Meharry Human Tissue Acquistion and Pathology Core is parent organization of: Meharry Molecular Biology Core Facility is parent organization of: Meharry Morphology Core is parent organization of: Meharry Medical College School of Graduate Studies and Research; Tennessee; USA is parent organization of: Meharry Proteomics Core is parent organization of: Meharry Microarray and Bioinformatics Core is parent organization of: Meharry Medical College Molecular Biology Core Facility is parent organization of: Meharry Medical College Labs and Facilities |
ISNI:0000 0001 0286 752X, nlx_66976, grid.259870.1, Wikidata:Q4026847 | https://ror.org/00k63dq23 | SCR_012863 | Meharry Medical, Meharry, Meharry Medical College | 2026-07-25 12:07:38 | 0 | |||||||
|
BEDOPS Resource Report Resource Website 100+ mentions |
BEDOPS (RRID:SCR_012865) | BEDOPS | software resource | A suite of tools to address common questions raised in genomic studies - mostly with regard to overlap and proximity relationships between data sets. |
is listed by: OMICtools is listed by: Debian |
PMID:22576172 DOI:10.1093/bioinformatics/bts277 |
GNU General Public License, v3 | OMICS_00949 | https://sources.debian.org/src/bedops/ | SCR_012865 | BEDOPS: high-performance genomic feature operations | 2026-07-25 12:07:42 | 220 | ||||||
|
EYE-EEG (combined eye-tracking & EEG) Resource Report Resource Website 10+ mentions |
EYE-EEG (combined eye-tracking & EEG) (RRID:SCR_012903) | EYE-EEG | software resource | A plugin for the open-source MATLAB toolbox EEGLAB developed with the goal to facilitate integrated analyses of electrophysiological and oculomotor data. The plugin parses, imports, and synchronizes simultaneously recorded eye tracking data and adds it as extra channels to the EEG. Saccades and fixations can be imported from the eye tracking raw data or detected with an adaptive velocity-based algorithm. Eye movements are then added as new time-locking events to EEGLAB's event structure, allowing easy saccade- and fixation-related EEG analysis (e.g., fixation-related potentials, FRPs). Alternatively, EEG data can be aligned to stimulus onsets and analyzed according to oculomotor behavior (e.g. pupil size, microsaccades) in a given trial. Saccade-related ICA components can be objectively identified based on their covariance with the electrically independent eye tracker. All functions can be accessed via EEGLAB's GUI or called from the command line. | eeg, meg, electrocorticography, matlab, os independent, eye, electrophysiology, oculomotor, eye tracking device |
is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) is related to: EEGLAB has parent organization: Humboldt University of Berlin; Berlin; Germany |
DFG | PMID:21744985 | GNU General Public License | nlx_155755 | http://www.nitrc.org/projects/eye-eeg | SCR_012903 | EYE-EEG: Eye tracking & EEG | 2026-07-25 12:07:41 | 13 | ||||
|
GENSCAN Resource Report Resource Website 100+ mentions |
GENSCAN (RRID:SCR_012902) | service resource | Resource out of service. Documented on February 24,2021. | has parent organization: German Cancer Research Center | Resource out of service. Documented on February 24,2021. | nif-0000-30609 | SCR_012902 | GENSCAN | 2026-07-25 12:07:39 | 192 | |||||||||
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Flash Gviewer Resource Report Resource Website 1+ mentions |
Flash Gviewer (RRID:SCR_012870) | Flash GViewer | software resource | Flash GViewer is a customizable Flash movie that can be easily inserted into a web page to display each chromosome in a genome along with the locations of individual features on the chromosomes. It is intended to provide an overview of the genomic locations of a specific set of features - eg. genes and QTLs associated with a specific phenotype, etc. rather than as a way to view all features on the genome. The features can hyperlink out to a detail page to enable to GViewer to be used as a navigation tool. In addition the bands on the chromosomes can link to defineable URL and new region selection sliders can be used to select a specific chromosome region and then link out to a genome browser for higher resolution information. Genome maps for Rat, Mouse, Human and C. elegans are provided but other genome maps can be easily created. Annotation data can be provided as static text files or produced as XML via server scripts. This tool is not GO-specific, but was built for the purpose of viewing GO annotation data. Platform: Online tool | visualization, chromosome, video, gene, qtl, genome, navitgation, phenotype, ontology or annotation visualization |
is listed by: Gene Ontology Tools is related to: Gene Ontology has parent organization: Medical College of Wisconsin; Wisconsin; USA |
Free for academic use | nlx_149333 | http://gmod.org/flashgviewer | SCR_012870 | 2026-07-25 12:07:38 | 2 | |||||||
|
Southern Illinois University; Illinois; USA Resource Report Resource Website |
Southern Illinois University; Illinois; USA (RRID:SCR_012873) | SIU | university | Public research university in Carbondale, Illinois. Founded in 1869, SIU is the oldest campus of the Southern Illinois University system. |
is parent organization of: Southern Illinois University School of Medicine; Illinois; USA is parent organization of: The Soybean GBrowse Database |
ISNI:0000 0001 0806 3768, nlx_144047, grid.263856.c, Wikidata:Q1472347 | https://ror.org/049kefs16 | SCR_012873 | SIU: Southern Illinois University, Southern Illinois University | 2026-07-25 12:07:38 | 0 | ||||||||
|
featureCounts Resource Report Resource Website 10000+ mentions |
featureCounts (RRID:SCR_012919) | featureCounts | software resource | A read summarization program, which counts mapped reads for the genomic features such as genes and exons. | bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools is required by: SL-quant |
PMID:24227677 | biotools:featurecounts, OMICS_01160 | https://bio.tools/featurecounts | SCR_012919 | featureCounts: a universal read summarization program | 2026-07-25 12:07:39 | 12197 | ||||||
|
National Institutes of Neurological Disorders and Stroke: Research Funding Resource Report Resource Website |
National Institutes of Neurological Disorders and Stroke: Research Funding (RRID:SCR_012874) | funding resource | Research funding for basic and clinical neuroscience trials to help train investigators and better understand diagnosis, treatment, and prevention of neurological disorders. Funds are allocated by Congress on a yearly basis. | epilepsy, epileptic seizure, funding resource, craniocervical injury, grant, grants, nervous system injury, nervous system trauma, neural stem cell, paralysis agitans, parkinson's, parkinson's disease, parkinson syndrome, seizure disorder, traumatic brain injury, research, funding, clinical, neuroscience, basic, trials | Available to the research community | nif-0000-01869 | SCR_012874 | NINDS Research Funding | 2026-07-25 12:07:40 | 0 | |||||||||
|
Netherlands Bioinformatics Centre Resource Report Resource Website 1+ mentions |
Netherlands Bioinformatics Centre (RRID:SCR_012879) | NBIC | institution | A collaborative institute of the bioinformatics groups in the Netherlands that perform cutting-edge research, develop novel tools and support platforms, create an e-science infrastructure and educate the next generations of bioinformaticians. They aim to build and maintain a strong bioinformatics and e-bioscience community that meets the (growing) demand for bioinformatics expertise, infrastructure and personnel in the Dutch life sciences field and provides a stimulating force for advanced research in biology. The NBIC grants aim to support the NBIC projects and (the visibility of) the NBIC community. Therefore, only people working in NBIC partner organizations can apply for sponsoring by NBIC. Positions for postdocs and others are available and there is a yearly conference. |
is related to: Open PHACTS is parent organization of: CoPub is parent organization of: WISECONDOR is parent organization of: PASSion is parent organization of: Concept Web Alliance is parent organization of: NARWHAL |
nif-0000-03485, grid.450192.b, Wikidata: Q6999142 | https://ror.org/01r0k6965 | SCR_012879 | Stichting Netherlands Bioinformatics Center, Stichting Netherlands Bioinformatics Centre, Netherlands Bioinformatics Center | 2026-07-25 12:07:38 | 2 | ||||||||
|
BicARE Resource Report Resource Website |
BicARE (RRID:SCR_012881) | BicARE | software resource | Biclustering Analysis and Results Exploration. |
is listed by: OMICtools has parent organization: Bioconductor |
Free | OMICS_01803 | SCR_012881 | 2026-07-25 12:07:40 | 0 | |||||||||
|
United States Department of Energy Resource Report Resource Website 50+ mentions |
United States Department of Energy (RRID:SCR_012841) | DOE | institution | The mission of the Department of Energy is to ensure America''s security and prosperity by addressing its energy, environmental, and nuclear challenges through transformative science and technology solutions. Goal 1: Transform our Energy Systems - Catalyze the timely, material, and efficient transformation of the nation''s energy system and secure U.S. leadership in clean energy technologies. Goal 2: The Science and Engineering Enterprise - Maintain a vibrant U.S. effort in science and engineering as a cornerstone of our economic prosperity, with clear leadership in strategic areas. Goal 3: Secure Our Nation - Enhance nuclear security through defense, nonproliferation, and environmental efforts. Goal 4: Management and Operational Excellence - Establish an operational and adaptable framework that combines the best wisdom of all Department stakeholders to maximize mission success. |
is parent organization of: Microbial Genomics Program is parent organization of: Argonne National Laboratory is parent organization of: Brookhaven National Laboratories; New York; USA is parent organization of: Human Genome Project Information |
nlx_86742, grid.85084.31, Wikidata: Q217810, ISNI: 123423717, Crossref funder ID: 100000015 | https://ror.org/01bj3aw27 | SCR_012841 | US Department of Energy, U.S. Department of Energy, Department of Energy, U.S. DOE, US DOE | 2026-07-25 12:07:41 | 63 | ||||||||
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USAID Resource Report Resource Website 100+ mentions |
USAID (RRID:SCR_012846) | USAID | government granting agency | is parent organization of: DHS Program | SCR_012846 | U.S. Agency for International Development, US Agency for International Development, US AID, USAID from the American people | 2026-07-25 12:07:41 | 473 | |||||||||||
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dmrFinder Resource Report Resource Website 10+ mentions |
dmrFinder (RRID:SCR_012853) | dmrFinder | software resource | Function for differentially methylated regions (DMR) detection that is a part of the charm package in R/Bioconductor. |
is listed by: OMICtools has parent organization: Bioconductor |
OMICS_00621 | SCR_012853 | 2026-07-25 12:07:38 | 27 | ||||||||||
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Mauve Resource Report Resource Website 1000+ mentions |
Mauve (RRID:SCR_012852) | Mauve | software resource | THIS RESOURCE IS NO LONGER IN SERVICE. Documented on February 28,2023. Software as system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. | bio.tools |
is listed by: bio.tools has parent organization: University of Wisconsin-Madison; Wisconsin; USA |
DOI:10.1101/gr.2289704 | THIS RESOURCE IS NO LONGER IN SERVICE | OMICS_00940, biotools:mauve | https://bio.tools/mauve | http://gel.ahabs.wisc.edu/mauve/ | SCR_012852 | 2026-07-25 12:07:42 | 1569 | |||||
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Django Resource Report Resource Website 500+ mentions |
Django (RRID:SCR_012855) | software resource | Django is a high-level Python Web framework that encourages rapid development and clean, pragmatic design. Developed four years ago by a fast-moving online-news operation, Django was designed to handle two challenges: the intensive deadlines of a newsroom and the stringent requirements of the experienced Web developers who wrote it. It lets you build high-performing, elegant Web applications quickly. Django focuses on automating as much as possible and adhering to the DRY principle. | nif-0000-30460 | SCR_012855 | Django | 2026-07-25 12:07:39 | 561 | |||||||||||
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National Institute on Deafness and Other Communication Disorders Resource Report Resource Website 50+ mentions |
National Institute on Deafness and Other Communication Disorders (RRID:SCR_012859) | NIDCD | institution | The National Institute on Deafness and Other Communication Disorders (NIDCD) is one of the Institutes that comprise the National Institutes of Health (NIH). Established in 1988, NIDCD is mandated to conduct and support biomedical and behavioral research and research training in the normal and disordered processes of hearing, balance, smell, taste, voice, speech, and language. The Institute also conducts and supports research and research training related to disease prevention and health promotion; addresses special biomedical and behavioral problems associated with people who have communication impairments or disorders; and supports efforts to create devices which substitute for lost and impaired sensory and communication function. It is estimated that more than 46 million people in the United States suffer some form of disordered communication. NIDCD has focused national attention on disorders of human communication and has contributed to advances in biomedical and behavioral research that will improve the lives of millions of individuals with communication disorders. NIDCD has made important contributions to the body of knowledge needed to help those who experience communication disorders and to advance research in all aspects of human communication. NIDCD accomplishes its mandate through the Division of Intramural Research, which conducts research in laboratories at the NIH, and the Extramural Research Program, a program of research grants, career development awards, individual and institutional research training awards, center grants, and contracts to public and private research institutions and organizations. As a whole, the Institute supports and conducts approximately 600 research projects. The Institute also conducts and supports research and research training in disease prevention and health promotion and the special biomedical and behavioral problems associated with people having communication impairments and disorders. NIDCD''s extramural grant portfolio demonstrates a balance of basic and clinical research. The intramural research program spans a variety of topics, including, but not limited to, the development of a vaccine against otitis media, the identification and characterization of genes responsible for hereditary hearing impairment, genes associated with neoplasms affecting human communication, and treatment of voice disorders. |
has parent organization: NIH Blueprint for Neuroscience Research has parent organization: National Institutes of Health |
nlx_inv_1005114, Crossref funder ID: 100000055, Wikidata: Q10843453, grid.214431.1, ISNI: 0000 0001 2226 8444 | https://ror.org/04mhx6838 | SCR_012859 | National Institute on Deafness Other Communication Disorders | 2026-07-25 12:07:42 | 75 |
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