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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Mutant Mouse Resource and Research Center - University of North Carolina Resource Report Resource Website 1+ mentions |
Mutant Mouse Resource and Research Center - University of North Carolina (RRID:SCR_016449) | UNC MMRRC, MMRRC UNC, MMRRC UNCCH | biomaterial supply resource, material resource | Center that is a mouse cryoarchive and distribution center, which incorporates research goals that synergize with and extend the value of the resource. The goals of the UNC Chapel Hill center are to streamline and improve operating procedures, establish a comprehensive cryoarchive, develop and disseminate computational tools for mouse genotyping, and examine the effect of paternal age and epigenetics on mutation rate. | mouse, cryogenic, mice, transgenic, knockout, genetic, mutant, mutation, epigenetics, research, animal | is organization facet of: Mutant Mouse Resource and Research Center | NIH Office of the Director U42 OD010924 | SCR_016449 | Mutant Mouse Resource and Research Center University of North Carolina, Mutant Mouse Resource and Research Center UNC, UNC Chapel Hill MMRRC, University of North Carolina Mutant Mouse Resource and Research Center, UNC Chapel Hill Mutant Mouse Resource and Research Center | 2026-08-29 11:31:23 | 3 | ||||||||
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University of Nebraska Medical Center Translational Mouse Model Core Facility Resource Report Resource Website |
University of Nebraska Medical Center Translational Mouse Model Core Facility (RRID:SCR_016452) | biomaterial supply resource, material resource | Center that conducts and supports research with mouse models. It also supplies mouse models to researchers. | mouse, mice, translation, biomedicine | has parent organization: University of Nebraska; Nebraska; USA | NIH Office of the Director R24 OD018546 | SCR_016452 | Center for Humanized Mice, UNMC Translational Mouse Model Core Facility | 2026-08-29 11:31:21 | 0 | |||||||||
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South Carolina Medical University Mass Spectrometry Core Facility Resource Report Resource Website 1+ mentions |
South Carolina Medical University Mass Spectrometry Core Facility (RRID:SCR_017959) | access service resource, core facility, service resource | Core provides expertise, services, education, and instrumentation to enhance biomedical research through LC-MS/MS-based proteomics. Services are offered for protein identification; characterization of post-translational modifications; and quantitative proteomics to identify differentially expressed/degraded proteins, regulated sites of post-translational modification, protein-protein interactions, and protein targets of drugs identified in phenotypic screens. Analyses include sample preparation, LC-MS/MS, database searching, generation of reports, and assistance with data interpretation. Faculty and staff assist with experimental design and development/optimization of customized methodology for analysis of post-translationally modified peptides (e.g. phosphorylation and O-GlcNAc modification, N- and O-linked glycosylation, Cys modifications including S-glutathionylation, and glycation of Lys and Arg). Quantitative approaches including metabolic labeling (SILAC), isobaric tagging (iTRAQ/TMT), and label free proteomics (LFQ) are performed on Orbitrap Elite or Orbitrap Fusion Lumos Mass Spectrometers. Developes methodology to identify alterations in post-translational modifications that impact signal transduction, transcription, translation, and response to therapeutics with goal of enabling investigators to discover molecular mechanisms underlying disease progression and therapeutic response. | Mass, spectrometry, expertise, service, education, instrumentation, proteomics, protein, identification, characterization, post translational, modification, target, drug, identification, phenotypic, screen, analysis, disease, service, core, ABRF | is listed by: ABRF CoreMarketplace | NIGMS P20 GM103542; NIH Office of the Director S10 OD010731 |
ABRF_985 | SCR_017959 | MUSC Mass Spectrometry Facility | 2026-08-29 11:33:17 | 1 | ||||||||
|
Northwestern University Center for Advanced Molecular Imaging Core Facility Resource Report Resource Website 10+ mentions |
Northwestern University Center for Advanced Molecular Imaging Core Facility (RRID:SCR_021192) | CAMI | access service resource, core facility, service resource | Provides access to range of preclinical imaging modalities and support services. These include MRI, nuclear imaging (PET, SPECT, and CT), in vivo bioluminescence and fluorescence imaging, animal housing and prep spaces, and tissue culture. Image analysis services are available, as are software packages (JIM, Amira, Matlab) and a workstation for users to perform their own data analysis. Imaging services can be provided for investigators' own animal models, or animal models can be supplied by the Developmental Therapeutics Core. | USEDit, MRI, nuclear imaging, in vivo bioluminescence and fluorescence imaging, animal housing and prep spaces, tissue culture, image analysis, ABRF, micro PET, micro SPECT, micro CT |
is listed by: ABRF CoreMarketplace is related to: NoCTURN |
NCI CA060553; NIH Office of the Director OD016398 |
open | ABRF_379 | https://coremarketplace.org/?FacilityID=379 | SCR_021192 | Northwestern University Center for Advanced Molecular Imaging (CAMI) | 2026-08-29 11:33:08 | 28 | |||||
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Penn State Hershey College of Medicine Zebrafish Functional Genomics Core Facility Resource Report Resource Website 1+ mentions |
Penn State Hershey College of Medicine Zebrafish Functional Genomics Core Facility (RRID:SCR_021199) | access service resource, core facility, service resource | Provides Penn State research community with modern, centralized facility for housing, breeding and performing experiments with zebrafish.Provides physical and intellectual infrastructure for investigators whose research can benefit from use of zebrafish as model system. | USEDit, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Pennsylvania State Hershey College of Medicine; Pennsylvania; USA |
NIH Office of the Director OD016619 | restricted | ABRF_1177 | https://coremarketplace.org/?FacilityID=1177 | SCR_021199 | Penn State Zebrafish Functional Genomics Core | 2026-08-29 11:33:08 | 4 | ||||||
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University of California at Santa Cruz Life Sciences Microscopy Center Core Facility Resource Report Resource Website 50+ mentions |
University of California at Santa Cruz Life Sciences Microscopy Center Core Facility (RRID:SCR_021135) | access service resource, core facility, service resource | Core facility affiliated with Institute for Biology of Stem Cells.Provides imaging instrumentation to biology research community including personalized assistance on various aspects of imaging.Offers assistance in experimental design,training on shared microscopes, image visualization and image analysis. | USEDit, IBSC, imaging instrumentation, imaging personalized assistance, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: University of California at Santa Cruz; California; USA |
NIH Office of the Director OD023528 | ABRF_1168 | https://coremarketplace.org/?FacilityID=1168 | SCR_021135 | UCSC Life Sciences Microscopy Center | 2026-08-29 11:33:23 | 61 | |||||||
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New York University Grossman School of Medicine Applied Bioinformatics Laboratories Facility Resource Report Resource Website 10+ mentions |
New York University Grossman School of Medicine Applied Bioinformatics Laboratories Facility (RRID:SCR_019178) | access service resource, core facility, service resource | Core provides computational analysis for high throughput genomic data, including but not limited to, next generation sequencing data. Our mission is to accelerate scientific discoveries by guiding experimental design, performing robust data quality assessment, and carrying out comprehensive computational analyses. Registration to iLab required. | USEDit, next generation sequencing data, genomic data, data quality assessment, computational analyses, ABRF, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: New York University School of Medicine; New York; USA |
NCI P30CA016087; NIH Office of the Director S10 OD010751 |
ABRF_819 | https://coremarketplace.org/?FacilityID=819 | SCR_019178 | Applied Bioinformatics Laboratories | 2026-08-29 11:33:20 | 10 | |||||||
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University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy Resource Report Resource Website 1+ mentions |
University of California at San Diego Institute for Genomic Medicine Genomics Center Core Facilitiy (RRID:SCR_022740) | access service resource, core facility, service resource | Provides services including sequencing library preparation and sequencing on Illumina MiSeq and NovaSeq 6000 platforms. Supports single cell sequencing on 10X Genomics Chromium Controller. Provides Illumina Infinium Beadchips, which includes variety of whole genome genotyping arrays as well as Infinium MethylationEPIC BeadChip. | USEDit, ABRF, sequencing library preparation, sequencing, single cell sequencing, whole genome genotyping arrays |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of California at San Diego; California; USA |
NCI P30CA023100; NIDDK P30DK063491; NIDDK P30DK120515; NIH Office of the Director S10 OD026929 |
ABRF_1025 | https://coremarketplace.org/?FacilityID=1025&citation=1 | SCR_022740 | UCSD IGM Genomics Center | 2026-08-29 11:33:30 | 2 | |||||||
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University of Pittsburgh Center for Research Computing Core Facility Resource Report Resource Website 100+ mentions |
University of Pittsburgh Center for Research Computing Core Facility (RRID:SCR_022735) | access service resource, core facility, service resource | Supports leading edge research with free access to advanced computing hardware and software. | USEDit, ABRF, advanced computing hardware and software services |
is listed by: ABRF CoreMarketplace is related to: USEDit has parent organization: University of Pittsburgh; Pennsylvania; USA |
NIH Office of the Director S10OD028483 | ABRF_1544 | https://coremarketplace.org/?FacilityID=1544&citation=1 | SCR_022735 | Center for Research Computing | 2026-08-29 11:33:32 | 385 | |||||||
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SAIBR Resource Report Resource Website 1+ mentions |
SAIBR (RRID:SCR_024804) | software application, software resource | Software application as platform independent protocol and FIJI plug-in to correct for autofluorescence using standard filter sets and illumination conditions. Spectral autofluorescence correction method based on simple 2- or 3-Channel images implemented in Python and Fiji. Used for performing spectral autofluorescence correction on biological images. | performing spectral autofluorescence correction, biological images, autofluorescence correction, | is a plug in for: Fiji | NIH Office of the Director P40 OD010440 | PMID:35713287 | Free, Available for download, Freely available | SCR_024804 | Spectral Autofluorescence Image Correction By Regression | 2026-08-29 11:33:46 | 1 | |||||||
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Development of Immunological Reagents for the Identification of New World Monkey Biomarkers Resource Report Resource Website |
Development of Immunological Reagents for the Identification of New World Monkey Biomarkers (RRID:SCR_024982) | data or information resource, portal, project portal | Project portal for generating recombinant NWM proteins, producing mouse monoclonal antibodies against New World Monkeys, validating immunological assays using these reagents, and distributing reagents and related scientific information to interested investigators. | NIH, ORIP, Office of Research Infrastructure Programs, generating recombinant NWM proteins, producing mouse monoclonal antibodies against New World Monkeys, validating immunological assays, | NIH Office of the Director 1R24OD030215-01A1 | SCR_024982 | 2026-08-29 11:33:50 | 0 | |||||||||||
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Hybrid Rat Diversity Program Resource Report Resource Website 1+ mentions |
Hybrid Rat Diversity Program (RRID:SCR_024983) | data or information resource, portal, project portal | Portal for Hybrid Rat Diversity Program with goal to extend the use of rat models for clinical translation through establishing animal resource and genomic dataset to facilitate the translation of laboratory research to clinical relevance. Specifically, the Hybrid Rat Diversity Panel resource provides the research community with foundation for systems genetics and tool for forward genetics. | NIH, ORIP, Office of Research Infrastructure Programs, rat models for clinical translation, | NIH Office of the Director 5R24OD024617-06 | DOI:10.1096/fasebj.2020.34.s1.03705 | SCR_024983 | 2026-08-29 11:33:51 | 2 | ||||||||||
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Center for Neuroanatomy with Neurotropic Viruses Resource Report Resource Website 100+ mentions |
Center for Neuroanatomy with Neurotropic Viruses (RRID:SCR_024984) | CNNV | data or information resource, organization portal, portal, project portal | This national resource was created to provide neuroscience community with access to reagents, training and facilities that are necessary to use neurotropic viruses as transneuronal tracers. | NIH, ORIP, Office of Research Infrastructure Programs, neurotropic viruses, transneuronal tracers, | NIH Office of the Director 2P40OD010996-16 | https://www.cnnv.pitt.edu/ | SCR_024984 | 2026-08-29 11:33:50 | 115 | |||||||||
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Bruker: Avance III HD Aeon 800 MHz Wide-Bore NMR Spectrometer Resource Report Resource Website |
Bruker: Avance III HD Aeon 800 MHz Wide-Bore NMR Spectrometer (RRID:SCR_028513) | instrument resource | High-field, ultra-sensitive system used by researchers for deep structural, dynamic, and metabolic analyses of complex molecules. Console: Avance III HD; Magnet: Aeon; Field Strength: 800 MHz Wide-bore; Software: TopSpin 3.8 on Alma 9.4; Probe: 3.2mm Efree HCN MAS; 3.2mm HXY MAS; 1.9mm HCN MAS; 1.3mm HCN MAS; 0.7mm HCND ultra-fast MAS. | NMR, spectrometer, 800 MHz Wide-Bore NMR, | is used by: Ohio State University Campus Chemical Instrument Center NMR Core Facility | NIH Office of the Director S10 OD012303 | Commercially available | https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/SCR_028513.pdf , https://raw.githubusercontent.com/SciCrunch/RRID-Instruments/refs/heads/main/PDF/Avance%20III%20HD%20SCR_028513.pdf | Model_Number_Bruker_Avance_III_HD_Aeon_800 MHz_Wide-Bore | https://people.ohioinnovationexchange.org/equipment/1696072, https://www.bruker.com/en/products-and-solutions/mr/nmr/avance-nmr-spectrometer.html | SCR_028513 | , Avance III HD Aeon 800 MHz Wide-Bore NMR Spectrometer system | 2026-08-29 11:35:47 | 0 | |||||
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RagTag Resource Report Resource Website 50+ mentions |
RagTag (RRID:SCR_027293) | software resource, software toolkit, source code | Collection of software tools for scaffolding and improving modern genome assemblies. Reference-based scaffolder. Used for fast and flexible genome assembly scaffolding and improvement. | Reference-based scaffolder, genome assembly scaffolding, scaffolding, genome assemblies, | European Research Council ; Howard Hughes Medical Institutes ; NIH Office of the Director S10OD028632; NSF ; Swiss National Science Foundation |
PMID:36522651 | SCR_027293 | 2026-08-29 11:35:14 | 91 | ||||||||||
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Maryland University Proteomics Core Facility Resource Report Resource Website |
Maryland University Proteomics Core Facility (RRID:SCR_017739) | access service resource, core facility, service resource | Facility is equipped withThermoFisher Orbitrap Fusion Lumos Tribrid mass spectrometer that is interfaced to Dionex Ultimate3000 RSLCnano HPLC system. Facility also maintains 2 separate data stations dedicated for proteomics data processing, database searching, and generation of reports. | Proteomics, mass, spectrometer, HPLC, data, processing, database, report, service, core | NIH Office of the Director S10 OD019938 | Open | ABRF_222 | SCR_017739 | Proteomics-Bioscience Cores | 2026-08-29 11:32:58 | 0 | ||||||||
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West Virginia University Flow Cytometry and Single Cell Core Facility Resource Report Resource Website 10+ mentions |
West Virginia University Flow Cytometry and Single Cell Core Facility (RRID:SCR_017738) | access service resource, core facility, service resource | Facility provides instrumentation and scientific support for single cell analysis and sorting. Routinely performs analysis of both eukaryotic and prokaryotic cells for expression of intracellular and extracellular proteins, cell cycle, cell proliferation, cytokine production, and cell sorting based on expression of cell surface antigen(s) and/or expression of genetically engineered intercellular fluorescent proteins. | Single, cell, analysis, sorting, flow, cytometry, West Virginia, service, core | NCRR RR020866; NIGMS P20 GM103434; NIGMS P20 GM109098; NIGMS P30 GM103488; NIGMS U51 GM104942; NIGMS U54 GM104942; NIH Office of the Director S10 OD016165 |
Open | ABRF_221 | SCR_017738 | FCSCCF, WVU Flow Cytometry and Single Cell Core Facility | 2026-08-29 11:33:13 | 15 | ||||||||
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Northwestern University Mary Beth Donnelley Clinical Pharmacology Core Facility Resource Report Resource Website |
Northwestern University Mary Beth Donnelley Clinical Pharmacology Core Facility (RRID:SCR_017768) | access service resource, core facility, service resource | Core provides quantitative mass spectrometry based support for in vitro studies and both preclinical and clinical studies of variety of small molecules, including cancer chemotherapeutic agents, analgesics, and antidepressants. Expertise includes optimizing design, conduct, analysis, interpretation, and reportage of pharmacokinetic studies. Helps with biological sample preparation, quantitative mass spectrometric drug concentration measurement, and drug concentration versus time data modeling. Small molecule concentrations in plasma and other body fluids are measured using Sciex 6500 QTrap with UPLC and nano LC or an Agilent HPLC system linked to Applied Biosystems API 3000 triple quadrupole mass spectrometer after sample preparation by, for example, solid-phase extraction. Drug concentration versus time relationships are fitted to various compartmental pharmacokinetic models using commercially available and specialized software. | Clinical, pre clinical, pharmacology, quantitative, mass, spectrometry, cancer, chemotherapeutic, agent, analgesic, antidepressant, design, analysis, pharmacokinetic, study, drug, concentratiion, measure, sample, preparation, service, core | NIH Office of the Director S10 OD021786 | Restricted | ABRF_326 | SCR_017768 | Mary Beth Donnelley Clinical Pharmacology Core Facility | 2026-08-29 11:33:16 | 0 | ||||||||
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Northwestern University Cancer Center Flow Cytometry Core Facility Resource Report Resource Website |
Northwestern University Cancer Center Flow Cytometry Core Facility (RRID:SCR_017766) | access service resource, core facility, service resource | Provides 6 cell sorters and 5 benchtop analyzers. Helps investigators to define their projects in the early stages of development to make optimal and efficient use of flow cytometry. Educates ALL users (faculty and staff) in the science and technology of flow cytometry. | Flow, cytometry, analysis, training, service, core | NCI CA060553; NIH Office of the Director S10 OD011996 |
Restricted | ABRF_315 | SCR_017766 | Robert H. Lurie Comprehensive Cancer Center Flow Cytometry Core Facility | 2026-08-29 11:32:59 | 0 | ||||||||
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Darthmouth Geisel School of Medicine DartMouse Core Facility Resource Report Resource Website 1+ mentions |
Darthmouth Geisel School of Medicine DartMouse Core Facility (RRID:SCR_017756) | access service resource, core facility, service resource | Core dedicated to facilitation and development of congenic mice for pre clinical projects across United States. Provides genotyping, background checks to verify purity of mice DNA. | Congenic, mouse, development, preclinical, project, genotyping, purity, DNA, verify, service, core, USEDit, ABRF |
is listed by: ABRF CoreMarketplace has parent organization: Dartmouth College; New Hampshire; USA |
NIH Office of the Director S10 OD021667 | Open | ABRF_278 | SCR_017756 | DartMouse | 2026-08-29 11:33:14 | 1 |
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