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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
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Leibniz Institute for Age Research Resource Report Resource Website 1+ mentions |
Leibniz Institute for Age Research (RRID:SCR_011340) | institution | Institute whose mission is to understand the molecular mechanisms that underlie the aging process and that lead to age-related diseases. They hope that eventually this knowledge can contribute to a more healthy aging of people. The central question they are aiming at answering is, What are the molecular mechanisms and genetic factors contributing to the evolution of cellular and organismal dysfunction during human aging? |
has parent organization: Fritz Lipmann Institute; Jena; Germany is parent organization of: Dinucleotide Property Database |
Aging, Age-related disease | nif-0000-30559 | SCR_011340 | Leibniz Institute for Age Research - Fritz Lipmann Institute | 2026-09-05 06:27:01 | 3 | |||||||||
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Leibniz Institute of Plant Genetics and Crop Plant Research; Saxony-Anhalt; Germany Resource Report Resource Website 1+ mentions |
Leibniz Institute of Plant Genetics and Crop Plant Research; Saxony-Anhalt; Germany (RRID:SCR_011341) | IPK | institution |
is related to: Pharma-Planta Consortium is parent organization of: MetaCrop is parent organization of: electronic Data Archive Library |
SCR_011341 | Leibniz-Institut fur Pflanzengenetik und Kulturpflanzenforschung, Leibniz-Institut fur Pflanzengenetik und Kulturpflanzenforschung (IPK), Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK), Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung, Leibniz Institute of Plant Genetics and Crop Plant Research, IPK Gatersleben | 2026-09-05 06:27:01 | 3 | |||||||||||
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Leiden University; Leiden; Netherlands Resource Report Resource Website 1+ mentions |
Leiden University; Leiden; Netherlands (RRID:SCR_011342) | university | Public research university in Leiden, Netherlands. Founded in 1575 by William, Prince of Orange as a reward to the town of Leiden for its defense against Spanish attacks during the Eighty Years' War, it is the oldest institution of higher education in the Netherlands. |
is related to: European Lead Factory is related to: Kinetics for Drug Discovery is related to: MIP-DILI is related to: Cytosplore Viewer is parent organization of: Leiden Open Variation Database is parent organization of: GPCR Natural Variants database is parent organization of: Kinetics for Drug Discovery is parent organization of: VOSviewer is parent organization of: Leiden University Medical Center Flow Cytometry Core Facility |
Wikidata:Q156598, grid.5132.5, Crossref funder ID:501100004116, ISNI:0000 0001 2312 1970, nlx_33496 | https://ror.org/027bh9e22 | SCR_011342 | Leiden University, Universiteit Leiden | 2026-09-05 06:27:02 | 1 | |||||||||
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Library of Congress Resource Report Resource Website 1+ mentions |
Library of Congress (RRID:SCR_011343) | Library of Congress | institution | The Library of Congress is the nation''s oldest federal cultural institution and serves as the research arm of Congress. It is also the largest library in the world, with millions of books, recordings, photographs, maps and manuscripts in its collections. The Library''s mission is to support the Congress in fulfilling its constitutional duties and to further the progress of knowledge and creativity for the benefit of the American people. Thousands of dedicated staff acquire, catalog, preserve, and make available library collections within our three buildings on Capitol Hill and over the Internet. | grid.241525.5, Crossref funder ID: 100005451, Wikidata: Q131454, nlx_149490, ISNI: 0000 0001 2108 1928 | https://ror.org/04p405e02 | SCR_011343 | 2026-09-05 06:27:01 | 5 | ||||||||||
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Liverpool School of Tropical Medicine; Liverpool; United Kingdom Resource Report Resource Website 1+ mentions |
Liverpool School of Tropical Medicine; Liverpool; United Kingdom (RRID:SCR_011345) | LSTM | institution | Institution dedicated to research and teaching in the field of tropical medicine. As a registered charity, they work in over 60 countries worldwide, often in very difficult circumstances, to fulfill their mission of reducing the burden of sickness and mortality in disease endemic countries through the delivery of effective interventions which improve human health and are relevant to the poorest communities. Their new Centre for Tropical and Infectious Diseases is a state of the art facility for developing new drugs, vaccines and pesticides which puts us at the forefront of infectious disease research. As a teaching institution, they attract more than 600 students from 68 countries, from PhD research and Masters programs to a range of short courses, and work in partnership with health ministries, universities and research institutions worldwide to train the next generation of doctors, scientists, researchers and health professionals. The provision of technical assistance is a major component of LSTM''s mission of promoting the improved health of the poor and disadvantaged peoples. LSTM consultancy improves health systems in developing countries whilst helping to inform their teaching and research agendas. | is related to: Predict-TB | Tropical disease, Tuberculosis, HIV, AIDS, Malaria, Dengue, Lymphatic filariasis | ISNI: 0000 0004 1936 9764, nlx_158247, Wikidata: Q3835531, grid.48004.38 | https://ror.org/03svjbs84 | SCR_011345 | Liverpool School of Tropical Medicine (LSTM), Liverpool School of Tropical Medicine | 2026-09-05 06:27:02 | 5 | |||||||
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Los Alamos National Laboratory Resource Report Resource Website 10+ mentions |
Los Alamos National Laboratory (RRID:SCR_011349) | LANL | national laboratory | Los Alamos National Laboratory is a premier national security research institution, delivering scientific and engineering solutions for the nation''s most crucial and complex problems. Our primary responsibility is ensuring the safety, security, and reliability of the nation''s nuclear deterrent. The Los Alamos of today emphasizes worker safety, effective operational safeguards & security, and environmental stewardship, while outstanding science remains the foundation of the Laboratory. In addition to supporting the Lab''s core national security mission, our work advances bioscience, chemistry, computer science, earth and environmental sciences, materials science, and physics disciplines. |
is related to: Influenza Research Database (IRD) is parent organization of: HIV Databases is parent organization of: Sequedex is parent organization of: Memento is parent organization of: HPV Sequence Database is parent organization of: MRIVIEW is parent organization of: Influenza Research Database (IRD) hosts: National High Magnetic Field Laboratory |
nlx_71073 | SCR_011349 | Los Alamos | 2026-09-05 06:27:01 | 25 | |||||||||
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Louisiana State University; Louisiana; USA Resource Report Resource Website 1+ mentions |
Louisiana State University; Louisiana; USA (RRID:SCR_011351) | LSU | university | Officially Louisiana State University and Agricultural and Mechanical College, commonly referred to as LSU is a public land-grant research university in Baton Rouge, Louisiana.The university was founded in 1853 in what is now known as Pineville, Louisiana, under the name Louisiana State Seminary of Learning and Military Academy. |
is parent organization of: Louisiana State University Health Sciences Center New Orleans; Louisiana; USA is parent organization of: Louisiana State University Labs and Facilities is parent organization of: Oil Spill Topic Map is parent organization of: Merial/NIH Veterinary Scholars Program is parent organization of: Louisiana State University School of Medicine; Louisiana; USA is parent organization of: LSU AgCenter Biotechnology Laboratory is parent organization of: LSU Pennington Biomedical Research Center Labs and Facilities is parent organization of: Louisiana State University in Shreveport CAIPP Immunophenotyping Core Facility is parent organization of: Louisiana State University in Shreveport CAIPP Bioinformatics and Modeling Core Facility is parent organization of: Louisiana State University in Shreveport Redox Molecular Signaling Core Facility is parent organization of: Louisiana State University in Shreveport Small Animal Imaging Core Facility is parent organization of: Louisiana State University in Shreveport Animal Models and Histology Core Facility is parent organization of: Louisiana State University in Shreveport Research Core Facility is parent organization of: Louisiana State University Health Sciences Shreveport INLET High Throughput Screening Core Facility is parent organization of: Louisiana State University Health Shreveport Library is parent organization of: Louisiana State University Health Sciences Center Shreveport Feist Weiller Cancer Center Biorepository Core Facility is parent organization of: Louisiana State University Mass Spectrometry Core Facility is parent organization of: Louisiana State University in Shreveport Center for Cardiovascular Diseases and Sciences (CCDS) Surgical Models Core Facility is parent organization of: Louisiana State University in Shreveport Center for Cardiovascular Diseases and Sciences (CCDS) Virus Production Core Facility is parent organization of: Louisiana State University Health Sciences Center Shreveport Metabolomics and Machine Learning Core Facility is parent organization of: Louisiana State University Health Sciences Center Shreveport hiPSC and Cell Models Core Facility is parent organization of: Louisiana State University Pennington Biomedical Research Center Bioinformatics and Computational Biology Core Facility |
nlx_62819, Crossref funder ID:100008294, Wikidata:Q1521725, grid.64337.35, ISNI:0000 0001 0662 7451 | https://ror.org/05ect4e57 | SCR_011351 | LSU | 2026-09-05 06:27:02 | 9 | ||||||||
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Sorbonne University; Paris; France Resource Report Resource Website |
Sorbonne University; Paris; France (RRID:SCR_000246) | UPMC | university | A public research university in France that emphasizes medical and scientific research centered on four themes: life and health, the living earth and environment, matter and new materials and modeling and engineering. It is a member of the Sorbonne Universities alliance. | public, engineering, modeling, environment, france, public research university, living earth |
is related to: EMIF is parent organization of: Parseq is parent organization of: Cordelier Research Center is parent organization of: XNBC |
, Wikidata: Q41497113, GRID: grid.462844.8, Crossref Funder ID: 501100019125, ISNI: 0000 0001 2308 1657, nlx_17035 | https://ror.org/02en5vm52 | SCR_000246 | , University Pierre and Marie Curie, Pierre and Marie Curie University, University Pierre et Marie Curie, Sorbonne Université; Pierre and Marie Curie University, Paris; Universite Pierre et Marie Curie | 2026-09-05 06:24:16 | 0 | |||||||
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GEArray Expression Analysis Suite 2.0 Resource Report Resource Website 1+ mentions |
GEArray Expression Analysis Suite 2.0 (RRID:SCR_000282) | software resource | THIS RESOURCE HAS BEEN DISCONTINUED, documented April 15, 2016. New GEArray Expression Analysis Suite 2.0 was released at Dec 21, 2006, please read Release Notices for details. SABiosciences' GEArray Analysis Suite uses advanced Java functionality. In order to experience full functionality of this Portal, the following free programs and upgrades for PC and Macs should be properly installed. PC Environment Downloads Browser compatibility is not an issue on Windows systems, so all operating systems running Windows 98 and above and either Internet explorer or Netscape should be fine. Java 1.4.1 or above is required--this should download automatically upon the first entry into the Portal. If this does not happen, Java 1.5 is available for download from the following URL: Java 1.5 Mac Environment Downloads Browser compatibility is an issue, and Mac Operating Systems prior to Panther are not able to fully take advantage of this Portal's functionality. These programs need to be downloaded and installed in a specific order as follows: Panther 10.3.5 (Operating System), Safari 1.2 (Compatible Internet Browser) and Java 1.4.2 (Java environment). Abstract. INTRODUCTION: Toll-like receptors (TLR) comprehend an emerging family of receptors that recognize pathogen-associated molecular patterns and promote the activation of leukocytes. Surgical trauma and ischemia-reperfusion injury are likely to provide exposure to endogenous ligands for TLR in virtually all kidney transplant recipients. METHODS: Macroarray (GEArray OHS-018.2 Series-Superarray) analyses of 128 genes involved in TLR signaling pathway were performed in nephrectomy samples of patients with chronic allograft nephropathy (CAN) and acute rejection (AR, vascular and non vascular). The analysis of each membrane was performed by GEArray Expression Analysis Suite 2.0. RESULTS: Macroarray profile identified a gene expression signature that could discriminate CAN and AR. Three genes were significantly expressed between CAN and vascular AR: Pellino 2; IL 8 and UBE2V1. In relation to vascular and non-vascular AR, there were only two genes with statistical significance: IL-6 and IRAK-3. CONCLUSION: Vascular and non-vascular AR and CAN showed different expression of a few genes in TLR pathway. The analysis of nephrectomy showed that activation of TLR pathway is present in AR and CAN. Sponsor. This work was supported by the inconditional grant from Fundao de Amparo a Pesquisa do Estado de So Paulo (FAPESP, 04/08311-6), from Conselho Nacional de Pesquisa e Desenvolvimento (CNPq) and from Fundao Osvaldo Ramos. | THIS RESOURCE IS NO LONGER IN SERVICE | nif-0000-30602 | SCR_000282 | GEArray | 2026-09-05 06:24:17 | 9 | ||||||||||
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BLASTPLOT Resource Report Resource Website |
BLASTPLOT (RRID:SCR_000162) | BLASTPLOT | software resource | A PERL module that can quickly plot the BLAST results from short sequences (primers, probes, reads) against reference targets. This software generates PNG graphs for all of the reference sequences associated with a BLAST result set. | perl, blast, short sequence, primer, png, png graph |
is listed by: OMICtools has parent organization: SourceForge |
PMID:24685334 | Free, Available for download, Freely available | OMICS_01433 | SCR_000162 | 2026-09-05 06:24:15 | 0 | |||||||
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GemSIM Resource Report Resource Website |
GemSIM (RRID:SCR_000167) | GemSIM | software resource | A software package for generating realistic simulated next-generation genome sequencing reads with quality score values. The software is written in Python with a command-line user interface. | bioinformatics, simulation, sequencing, dna, rna, empirical models, Python, command-line, user interface, metagenomic, resequencing, bio.tools |
is listed by: OMICtools is listed by: Debian is listed by: bio.tools has parent organization: SourceForge is required by: Wessim |
PMID:22336055 DOI:10.1186/1471-2164-13-74 |
Free, Available for download, Freely available | OMICS_01507, biotools:GemSIM | https://bio.tools/GemSIM | SCR_000167 | 2026-09-05 06:24:15 | 0 | ||||||
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GMATo Resource Report Resource Website 1+ mentions |
GMATo (RRID:SCR_000165) | data analysis software, data processing software, sequence analysis software, software application, software resource | A software tool used for simple sequence repeats (SSR) or microsatellite characterization. It also facilitates SSR marker design on a genomic scale, microsatellite mining at any length, and comprehensive statistical analysis for DNA sequences in any genome at any size. Analysis parameters are customizable. | simple sequence repeat, ssr, microsatellite, genomic, marker design, sequence analysis software |
is listed by: OMICtools has parent organization: SourceForge |
PMID:23861572 | Free, Available for download, Freely available | OMICS_00106 | SCR_000165 | Genome-wide Microsatellite Analyzing Tool, Genome Microsatellite Analyzing Tool, Genome-wide Microsatellite Analyzing Tool (GMATo) | 2026-09-05 06:24:13 | 1 | |||||||
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ProteinProphet Resource Report Resource Website 10+ mentions |
ProteinProphet (RRID:SCR_000286) | software resource | Software that automatically validates protein identifications made on the basis of peptides assigned to MS/MS spectra by database search programs such as SEQUEST. | standalone software, bio.tools |
is listed by: OMICtools is listed by: bio.tools is listed by: Debian is listed by: SoftCite has parent organization: SourceForge |
PMID:14632076 | OMICS_02521, biotools:proteinprophet | https://bio.tools/proteinprophet | SCR_000286 | 2026-09-05 06:24:16 | 11 | ||||||||
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University of Illinois College of Pharmacy Resource Report Resource Website |
University of Illinois College of Pharmacy (RRID:SCR_000280) | university | A public pharmacy school, part of the University of Illinois. It offers a four-year professional degree program that leads to the PharmD, the highest level of professional education in pharmacy. The college also offers programs leading to six master's degrees and four doctorate degrees, covering a spectrum of research areas within the pharmaceutical sciences. | pharmacy, education, master, doctorate, pharmaceuticals, public | has parent organization: University of Illinois at Chicago; Illinois; USA | nlx_63570 | SCR_000280 | UICCP | 2026-09-05 06:24:16 | 0 | |||||||||
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INCF Dataspace Resource Report Resource Website 1+ mentions |
INCF Dataspace (RRID:SCR_000158) | DataSpace | data repository, service resource, storage service resource |
THIS RESOURCE IS NO LONGER IN SERVICE. Documented August 21, 2017. Repository for sharing of neuroscience data, text, images, sounds, movies, models and simulations. |
neuroscience, text, image, sound, video, model, simulation, data sharing, preservation | has parent organization: International Neuroinformatics Coordinating Facility | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_157665 | SCR_000158 | 2026-09-05 06:24:14 | 2 | ||||||||
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University of Stuttgart; Stuttgart; Germany Resource Report Resource Website |
University of Stuttgart; Stuttgart; Germany (RRID:SCR_000153) | university | A public research university with 10 programs in disciplines of science, social science and humanities. The institution has technical programs in civil, mechanical, industrial and electrical engineering. | germany, engineering, interdisciplinary, science, social science, humanities | is parent organization of: Lipase Engineering Database | nlx_71546 | http://www.uni-stuttgart.de/index.en.html | SCR_000153 | 2026-09-05 06:24:14 | 0 | |||||||||
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iFad Resource Report Resource Website |
iFad (RRID:SCR_000271) | iFad | software resource | An R software package implementing a bayesian sparse factor model for the joint analysis of paired datasets, the gene expression and drug sensitivity profiles, measured across the same panel of samples, e.g. cell lines. | r, gene expression, drug sensitivity, analysis, drug-pathway association, gene-pathway, pathway, gene, drug |
is listed by: OMICtools has parent organization: Yale School of Medicine; Connecticut; USA |
PMID:22581178 | Free, Available for download, Freely available | OMICS_01959 | SCR_000271 | 2026-09-05 06:24:15 | 0 | |||||||
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GramCluster Resource Report Resource Website |
GramCluster (RRID:SCR_000272) | GramCluster | software resource | Software implementing a fast and accurate progressive clustering algorithm that relies on a grammar-based sequence distance and is particularly useful in clustering large datasets. | 16s sequence, cluster |
is listed by: OMICtools has parent organization: University of Nebraska; Nebraska; USA |
PMID:21167044 | Free, Available for download, Freely available | OMICS_01956 | SCR_000272 | 2026-09-05 06:24:17 | 0 | |||||||
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Postgwas Resource Report Resource Website |
Postgwas (RRID:SCR_000156) | software resource | A comprehensive software toolkit for post-processing, visualization and advanced analysis of GWAS results. | standalone software, r |
is listed by: OMICtools has parent organization: CRAN |
PMID:23977141 | Free, Available for download, Freely available | OMICS_04393 | SCR_000156 | 2026-09-05 06:24:12 | 0 | ||||||||
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Queens University; Ontario; Canada Resource Report Resource Website |
Queens University; Ontario; Canada (RRID:SCR_000278) | university | Public university in Ontario, Canada that offers degree programs in the social sciences and engineering at both the undergraduate, graduate, postdoctorate and professional level. The university operates six research centers that focus on disciplines such as neuroscience, computing, human mobility and Southern African research. | ontario, canada, public, social science, engineering, professional degrees, undergraduate, graduate, masters, neuroscience |
is parent organization of: BLIMP: Biomedical LIterature Mining Publications is parent organization of: F-SNP: a collection of functional SNPs, specifically prioritized for disease association studies is parent organization of: Kinarm: End-Point Lab is parent organization of: Queen's University Translational Institute of Medicine TIME Core Facility |
grid.410356.5, ISNI:0000 0004 1936 8331, SCR_017061, Crossref funder ID:501100003321, Wikidata:Q1420038, nlx_63241 | https://ror.org/02y72wh86 | SCR_000278 | Queen's College at Kingston, Queens University; Kingston; Canada | 2026-09-05 06:24:16 | 0 |
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