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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Cell Cycle Ontology Resource Report Resource Website |
Cell Cycle Ontology (RRID:SCR_007085) | CCO | controlled vocabulary, data or information resource, ontology | An application ontology integrating knowledge about the eukaryotic cell cycle. | obo | is listed by: BioPortal | nlx_157355 | http://www.semantic-systems-biology.org/cco/ | SCR_007085 | 2026-07-28 09:41:50 | 0 | ||||||||
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suicideonto Resource Report Resource Website |
suicideonto (RRID:SCR_010452) | suicideo | controlled vocabulary, data or information resource, ontology | Ontology of suicidology. | owl | is listed by: BioPortal | nlx_157633 | SCR_010452 | 2026-07-28 09:42:51 | 0 | |||||||||
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Human Developmental Anatomy Ontology abstract version 2 Resource Report Resource Website |
Human Developmental Anatomy Ontology abstract version 2 (RRID:SCR_010337) | EHDAA2 | controlled vocabulary, data or information resource, ontology | A structured controlled vocabulary of stage-specific anatomical structures of the human. It has been designed to mesh with the mouse anatomy and incorporates each Carnegie stage of development (CS1-20). The abstract version of the human developmental anatomy ontology compresses all the tissues present over Carnegie stages 1-20 into a single hierarchy. The heart, for example, is present from Carnegie Stage 9 onwards and is thus represented by 12 EHDA IDs (one for each stage). In the abstract mouse, it has a single ID so that the abstract term given as just ''heart'' really means ''heart (CS 9-20)''. Timing details will be added to the abstract version of the ontology in a future release. | obo | is listed by: BioPortal | nlx_157430 | SCR_010337 | 2026-07-28 09:42:47 | 0 | |||||||||
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Ontology of Data Mining Investigations Resource Report Resource Website |
Ontology of Data Mining Investigations (RRID:SCR_010394) | ONTODM-KDD | controlled vocabulary, data or information resource, ontology | Ontology for representing data mining investigations. Its goal is to allow the representation of knowledge discovery processes and be general enough to represent the data mining investigations. The ontology is based on the CRISP-DM process methodology. | owl | is listed by: BioPortal | nlx_157527 | SCR_010394 | 2026-07-28 09:42:49 | 0 | |||||||||
|
Traditional Medicine Meridian Value Sets Resource Report Resource Website |
Traditional Medicine Meridian Value Sets (RRID:SCR_010436) | TM-MER | controlled vocabulary, data or information resource, ontology | Ontology of the meridian value set used in the International Classification of Traditional Medicine. | owl | is listed by: BioPortal | nlx_157613 | SCR_010436 | 2026-07-28 09:42:51 | 0 | |||||||||
|
Cell Line Ontology by Mahadevan Resource Report Resource Website |
Cell Line Ontology by Mahadevan (RRID:SCR_010281) | MCCL | controlled vocabulary, data or information resource, ontology | A comprehensive ontology on primary and established cell lines-both normal and pathologic. It covers around 400 cell lines. This ontology has been built to include the major domains in the field of biology like anatomy, bio-molecules, chemicals and drugs, pathological conditions and genetic variations around the cell lines. An extensive network of relations has been built across these concepts to enable different combinations of queries. The ontology covers all cell lines from major sources like ATCC, DSMZ, ECACC, ICLC etc. and is built in OWL format. | owl, cell line | is listed by: BioPortal | Normal, Pathologic | nlx_157356 | SCR_010281 | Cell Line Ontology (by Mahadevan) | 2026-07-28 09:42:41 | 0 | |||||||
|
National Drug File - Reference Terminology Resource Report Resource Website |
National Drug File - Reference Terminology (RRID:SCR_010372) | NDFRT | controlled vocabulary, data or information resource, ontology | Ontology of National Drug File - Reference Terminology Public Inferred Edition, 2008_03_11 | umls | is listed by: BioPortal | nlx_157500 | SCR_010372 | 2026-07-28 09:42:45 | 0 | |||||||||
|
Vertebrate Homologous Organ Group Ontology Resource Report Resource Website |
Vertebrate Homologous Organ Group Ontology (RRID:SCR_010444) | VHOG | controlled vocabulary, data or information resource, ontology | A multi-species anatomical ontology for the vertebrate lineage, developed as part of the Bgee project. The mapping to species-specific anatomical ontologies is provided as a separated file: http://bgee.unil.ch/download/organ_association_vHOG.txt This mapping represents homology-strict relationships, in the sense of HOM:0000007 historical homology. Each mapping has been manually reviewed, and theye provide confidence codes and references when available. | obo | is listed by: BioPortal | nlx_157623 | SCR_010444 | 2026-07-28 09:42:48 | 0 | |||||||||
|
Veterans Health Administration National Drug File Resource Report Resource Website |
Veterans Health Administration National Drug File (RRID:SCR_010445) | VANDF, NDF | controlled vocabulary, data or information resource, ontology | Ontology that includes information on clinical drugs, drug classes, ingredients and National Drug Code (NDC) Directory codes. | umls | is listed by: BioPortal | nlx_157626 | SCR_010445 | 2026-07-28 09:42:51 | 0 | |||||||||
|
Vital Sign Ontology Resource Report Resource Website 1+ mentions |
Vital Sign Ontology (RRID:SCR_010446) | VSO | controlled vocabulary, data or information resource, ontology | An extension of the Ontology for General Medical Science (OGMS) that covers the four consensus human vital signs: blood pressure, body temperature, respiration rate, pulse rate. VSO provides also a controlled structured vocabulary for describing vital signs measurement data, the various processes of measuring vital signs, and the various devices and anatomical entities participating in such measurements. | owl | is listed by: BioPortal | nlx_157627 | SCR_010446 | 2026-07-28 09:42:46 | 1 | |||||||||
|
suicideo Resource Report Resource Website |
suicideo (RRID:SCR_010451) | SuicidO | controlled vocabulary, data or information resource, ontology | Ontology of suicidology. | owl | is listed by: BioPortal | nlx_157632 | SCR_010451 | 2026-07-28 09:42:48 | 0 | |||||||||
|
Pseudogene Resource Report Resource Website 100+ mentions |
Pseudogene (RRID:SCR_010453) | pseudo | controlled vocabulary, data or information resource, ontology | Ontology for pseudogenes including biological feature, classified type, Evidence code, and subcellular origin. | obo | is listed by: BioPortal | nlx_157640 | SCR_010453 | 2026-07-28 09:42:46 | 141 | |||||||||
|
Terminology for the Description of Dynamics Resource Report Resource Website 1+ mentions |
Terminology for the Description of Dynamics (RRID:SCR_010454) | TEDDY | controlled vocabulary, data or information resource, ontology | Ontology for dynamical behaviors, observable dynamical phenomena, and control elements of bio-models and biological systems in Systems Biology and Synthetic Biology. | Ontology for dynamical behaviors, Systems Biology, Synthetic Biology, ontology, owl, dynamical behaviors, observable dynamical phenomena, control elements, bio-models and biological systems | is listed by: BioPortal | nlx_157641 | http://purl.bioontology.org/ontology/MO | SCR_010454 | 2026-07-28 09:42:48 | 9 | ||||||||
|
Symptom Ontology Resource Report Resource Website |
Symptom Ontology (RRID:SCR_010388) | SYMP | controlled vocabulary, data or information resource, ontology | Ontology designed around the guiding concept of a symptom being: A perceived change in function, sensation or appearance reported by a patient indicative of a disease. Understanding the close relationship of Signs and Symptoms, where Signs are the objective observation of an illness, the Symptom Ontology will work to broaden it''s scope to capture and document in a more robust manor these two sets of terms. Understanding that at times, the same term may be both a Sign and a Symptom | owl | is listed by: BioPortal | nlx_157599 | SCR_010388 | 2026-07-28 09:42:49 | 0 | |||||||||
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STATistics Ontology Resource Report Resource Website |
STATistics Ontology (RRID:SCR_010421) | STATO | controlled vocabulary, data or information resource, ontology | A general-purpose STATistics Ontology to provide coverage for processes such as statistical tests, their conditions of applications, and information needed or resulting from statistical methods, such as probability distributions, variable, spread and variation metrics. STATO also covers aspects of experimental design and description of plots and graphical representations commonly used to provide visual cues of data distribution or layout and to assist review of the results. | owl | is listed by: BioPortal | nlx_157579 | SCR_010421 | 2026-07-28 09:42:50 | 0 | |||||||||
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Sage Bionetworks Synapse Ontology Resource Report Resource Website |
Sage Bionetworks Synapse Ontology (RRID:SCR_010422) | SYN | controlled vocabulary, data or information resource, ontology | Controlled vocabulary used for various entity properties in the Synapse platform. | owl | is listed by: BioPortal | nlx_157580 | SCR_010422 | 2026-07-28 09:42:45 | 0 | |||||||||
|
Sample Processing and Separation Techniques Ontology Resource Report Resource Website |
Sample Processing and Separation Techniques Ontology (RRID:SCR_010423) | SEP | controlled vocabulary, data or information resource, ontology | A structured controlled vocabulary for the annotation of sample processing and separation techniques in scientific experiments, such as, and including, gel electrophoresis, column chromatography, capillary electrophoresis, centrifugation and so on. Developed jointly by the HUPO Proteomics Standards Initiative and The Metabolomics Standards Initiative. | obo |
is listed by: BioPortal has parent organization: HUPO Proteomics Standards Initiative |
nlx_157581 | SCR_010423 | 2026-07-28 09:42:47 | 0 | |||||||||
|
Ontology of Biological and Clinical Statistics Resource Report Resource Website 1+ mentions |
Ontology of Biological and Clinical Statistics (RRID:SCR_010391) | OBCS | controlled vocabulary, data or information resource, ontology | A biomedical ontology in the domain of biological and clinical statistics that is primarily targeted for statistical representation in the fields in biological, biomedical, and clinical domains. It uses the Basic Formal Ontology (BFO) as the upper level ontology. OBCS imports all biostatistics related terms in the Ontology for Biomedical Investigations (OBI) including all logical axioms. | owl | is listed by: BioPortal | nlx_157524 | SCR_010391 | 2026-07-28 09:42:49 | 1 | |||||||||
|
Ontology of Clinical Research Resource Report Resource Website 1+ mentions |
Ontology of Clinical Research (RRID:SCR_010392) | OCRE | controlled vocabulary, data or information resource, ontology | Ontology to support systematic description of, and interoperable queries on, human studies and study elements. | owl | is listed by: BioPortal | nlx_157525 | SCR_010392 | 2026-07-28 09:42:45 | 1 | |||||||||
|
Taxonomic Rank Vocabulary Resource Report Resource Website |
Taxonomic Rank Vocabulary (RRID:SCR_010430) | TAXRANK | controlled vocabulary, data or information resource, ontology | A vocabulary of taxonomic ranks intended to replace the sets of rank terms found in the Teleost Taxonomy Ontology, the OBO translation of the NCBI taxonomy and similar OBO taxonomy ontologies. It provides terms for taxonomic ranks drawn from both the NCBI taxonomy database and from a rank vocabulary developed for the TDWG biodiversity information standards group. Cross references to appearances of each term in each source are provided. Consistent with its intended use as a vocabulary of labels, there is no relation specifying an ordering of the rank terms. | obo | is listed by: BioPortal | nlx_157606 | SCR_010430 | 2026-07-28 09:42:50 | 0 |
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