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SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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BestGene Resource Report Resource Website 500+ mentions |
BestGene (RRID:SCR_012605) | BestGene | commercial organization, core facility, access service resource, service resource | We provide high quality Drosophila transgenic service to both research institutions and companies. We offer you partial to full service ranging from DNA preparation, embryo microinjection, screening for white+, yellow+, and/or GFP/RFP phenotypes, to balancing crosses. Most importantly, the cost of our Drosophila embryo injection services is more reasonable compared to that of others. With a large number of facilities and the highly experienced staff, we are able to initiate the process immediately upon receiving your sample. Our friendly web-based database allows you to track your sample status, service history and more. | FASEB list | is listed by: ScienceExchange | SciEx_532 | SCR_012605 | BestGene Inc., BestGene Inc | 2026-08-08 12:00:01 | 702 | ||||||||
|
Harvard NeuroDiscovery Center Labs and Facilities Resource Report Resource Website |
Harvard NeuroDiscovery Center Labs and Facilities (RRID:SCR_012695) | HNDC Labs & Facilities | core facility, data or information resource, access service resource, service resource, portal | Established in 2001 by Dr. Joseph Martin (Dean of Harvard Medical School, 1997-2007), the Harvard NeuroDiscovery Center is a pioneering biomedical research group focused on ending suffering from neurodegenerative diseases. By drawing on the intellectual strength and proven capability of the Harvard medical community and colleagues throughout the world, the NeuroDiscovery Center has developed a unique approach to understanding and treating these devastating diseases. |
is listed by: ScienceExchange is related to: HNDC Enhanced NeuroImaging Core is related to: HNDC NeuroBehavior Laboratory Core is related to: HNDC Advanced Tissue Resource Center has parent organization: Harvard Medical School; Massachusetts; USA |
SciEx_8885 | SCR_012695 | Harvard Medical School NeuroDiscovery Center Labs and Facilities, Harvard Medical School NeuroDiscovery Center Labs & Facilities | 2026-08-08 11:59:45 | 0 | |||||||||
|
Georgetown University Labs and Facilities Resource Report Resource Website |
Georgetown University Labs and Facilities (RRID:SCR_012694) | Georgetown Labs & Facilities, Georgetown Labs and Facilities | core facility, data or information resource, access service resource, service resource, portal | An Portal, Core facility |
is listed by: ScienceExchange has parent organization: Georgetown University; Washington D.C.; USA |
SciEx_893 | SCR_012694 | Georgetown University Labs & Facilities | 2026-08-08 12:00:16 | 0 | |||||||||
|
American Academy of Neurology Resource Report Resource Website 10+ mentions |
American Academy of Neurology (RRID:SCR_012739) | AAN | institution | An international professional association of 24,000 neurologists and neuroscience professionals dedicated to promoting the highest quality patient-centered neurologic care. They provide guidance and inspiration through education, information, policy development and advocacy for our members and their patients. The Academy''s professional website is only one of the domains associated with the AAN: * TheBrainMatters.org, public & patient education website * m.AAN.com, mobile AAN.com for members * Neurology journal * Neurology Now, patient magazine * Neurology Today, magazine for neurology professionals The AAN is committed to bringing its members the highest quality continuing medical education and professional education opportunities. The Academy''s Education programs cover the spectrum of neurological disorders, from the most prevalent to newly emerging issues. The AAN also provides a wide range of program formats, including in-depth print, convenient online, and hands-on workshop options. The AAN Annual Meeting brings together more than 10,000 neuroscience professionals for one of the world''s largest neurology gatherings. It has long been a leading showcase for the latest developments in scientific research, and the place to honor peers at the forefront of the work. The AAN offers a variety of publications, news, blogs, jobs, and practice guidelines. | clinical neurology, grant, human, neurological disorder, neurologist, neurology, neuroscience professional, patient, professional association, self-assessment examination, continuing medical education, journal |
is parent organization of: Neurology Podcast is parent organization of: American Academy of Neurology Research Fellowship Program |
Wikidata: Q4742898, nif-0000-00453, ISNI: 0000 0001 0280 2179, grid.417923.a, Crossref funder ID: 100005339 | https://ror.org/00mv9dj85 | SCR_012739 | 2026-08-08 11:59:46 | 16 | ||||||||
|
Emerald Bio Resource Report Resource Website |
Emerald Bio (RRID:SCR_012731) | Emerald Bio | commercial organization, core facility, access service resource, service resource | Supplies laboratory automation systems, reagent kits, stock solutions, proteins, and accessories for protein researchers. Tools to automate protein purification, liquid handling, and protein crystallization. Our reagents and stock solutions are available individually, in convenient screens, and as custom products. As the demands of protein research continue to grow, we now provide high purity proteins. | is listed by: ScienceExchange | SciEx_9022 | SCR_012731 | 2026-08-08 11:59:46 | 0 | ||||||||||
|
MiRaGE Resource Report Resource Website 10+ mentions |
MiRaGE (RRID:SCR_012738) | MiRaGE | software resource | Software package that contains functions for inference of target gene regulation by miRNA, based on only target gene expression profile. |
is listed by: OMICtools has parent organization: Bioconductor |
OMICS_00785 | SCR_012738 | 2026-08-08 12:00:16 | 33 | ||||||||||
|
TG Labs Resource Report Resource Website |
TG Labs (RRID:SCR_012581) | TG Labs | commercial organization, service resource | TG Labs Company, located in Colorado, has two divisions Technical division and Industrial division. Technical Division operates scientific, medical and chemical discovery laboratory in Englewood, Colorado. This division also develops special devices, equipment and processes for the medical, chemical and environmental industries. We offer proven solutions from concept through full scale production, including regulatory standards. | is listed by: ScienceExchange | SciEx_4986 | http://www.scienceexchange.com/facilities/tg-labs | SCR_012581 | 2026-08-08 12:00:01 | 0 | |||||||||
|
German Cancer Research Center Labs and Facilities Resource Report Resource Website |
German Cancer Research Center Labs and Facilities (RRID:SCR_012708) | DKFZ Labs & Facilities, DKFZ Labs and Facilities | core facility, data or information resource, access service resource, service resource, portal | To perform research into cancer is the task of the German Cancer Research Center (Deutsches Krebsforschungszentrum, DKFZ). DKFZ is the largest biomedical research institute in Germany and a member of the Helmholtz Association of National Research Centers. In over 70 divisions and research groups, our more than 2,500 employees, of which more than 1,000 are scientists, are investigating the mechanisms of cancer, are identifying cancer risk factors and are trying to find strategies to prevent people from getting cancer.They are developing novel approaches to make tumor diagnosis more precise and treatment of cancer patients more successful. |
is listed by: ScienceExchange is related to: DKFZ Genomics and Proteomics Core Facility has parent organization: German Cancer Research Center |
SciEx_8910 | SCR_012708 | German Cancer Research Center Labs & Facilities, German Cancer Research Center (DKFZ) Labs & Facilities, German Cancer Research Center (DKFZ) Labs and Facilities | 2026-08-08 11:59:45 | 0 | |||||||||
|
Alzheimer's Disease Education and Referral Center Resource Report Resource Website 1+ mentions |
Alzheimer's Disease Education and Referral Center (RRID:SCR_012787) | ADEAR | data or information resource, narrative resource, topical portal, training material, portal, disease-related portal | Portal for Alzheimer's disease that compiles, archives and disseminates information about current treatments, diagnostic tools and ongoing research for health professions, people with AD, their families and the public. The Center provides informational services and referrals for AD symptoms, diagnosis and treatment for patients; clinical trial information and literature searches for researchers; training materials and guidelines for caregivers; and Spanish language resources. | alzheimer's disease, brain, clinical trial, dementia, diagnosis, human, literature, news, prevention, publication, research center, risk factor, support, symptom, treatment, cure, late adult human, information, referrals |
has parent organization: National Institute on Aging is parent organization of: AD Clinical Trials Database |
Alzheimer's disease, Aging | NIA | Public | nif-0000-22511 | http://www.nia.nih.gov/Alzheimers/ | SCR_012787 | 2026-08-08 12:00:03 | 3 | |||||
|
Colorado State University Labs and Facilities Resource Report Resource Website |
Colorado State University Labs and Facilities (RRID:SCR_012667) | CSU Labs & Facilities, CSU Labs and Facilities | core facility, data or information resource, access service resource, service resource, portal | An Portal, Core facility |
is listed by: ScienceExchange is related to: CSU Proteomics and Metabolomics Facility has parent organization: Colorado State University; Colorado; USA |
SciEx_852 | SCR_012667 | Colorado State University Labs & Facilities | 2026-08-08 12:00:15 | 0 | |||||||||
|
University of Rochester Medical Center Neurobiology and Anatomy Resource Report Resource Website |
University of Rochester Medical Center Neurobiology and Anatomy (RRID:SCR_012705) | data or information resource, degree granting program, medical school program resource, undergraduate program resource, graduate program resource, training resource, people resource, portal, organization portal | The Department of Neurobiology and Anatomy is strongly committed to its major academic missions of research and education. Teaching and leadership roles in both graduate and medical education remain enduring commitments today, as they have been since the inception of the medical campus in the 1920s. This is matched by our commitment to research on the structure and function of the nervous system. | recommends: FluoroFinder | nif-0000-04007 | SCR_012705 | URMC | 2026-08-08 12:00:16 | 0 | ||||||||||
|
Samuel Roberts Noble Foundation Resource Report Resource Website 1+ mentions |
Samuel Roberts Noble Foundation (RRID:SCR_012794) | Noble Foundation | institution | The Samuel Roberts Noble Foundation is an independent, nonprofit institute headquartered in Ardmore, Okla. Founded in 1945, the Noble Foundation conducts direct operations, including assisting farmers and ranchers, and conducting plant science research and agricultural programs, to enhance agricultural productivity regionally, nationally and internationally. Employing more than 360 persons, the Noble Foundation conducts its operations through the activities of three operating divisions: * Agricultural Division: Serving a 47-county area within a 100-mile radius of the Noble Foundation''s headquarters in Ardmore, Okla., the Agricultural Division assists more than 1,700 regional farmers and ranchers in achieving their individual financial, production, stewardship and quality-of life goals. * Plant Biology Division: The Plant Biology Division conducts basic biochemical, genetic and genomic plant research for the purpose of improving crop productivity and value, and enhancing animal and human health. * Forage Improvement Division: The Forage Improvement Division translates basic plant science research into tangible plant varieties. Within the institution, the Forage Improvement Division serves as a link between the discoveries in the laboratory and the field, where such discoveries are intended to enhance agricultural outcomes in Oklahoma and around the world. The coordinated efforts of these operating divisions enable the Noble Foundation agricultural specialists and scientists to move science and innovation from the laboratory to the field, giving life to discovery and improving agriculture in Oklahoma, in the United States and around the world. |
is parent organization of: MedicCyc is parent organization of: LegumeIP is parent organization of: PlantTFcat is parent organization of: psRNATarget |
ISNI: 0000 0004 0370 5663, nlx_151456, grid.419447.b, Crossref funder ID: 100000944 | https://ror.org/02zta5505 | SCR_012794 | Noble Foundation | 2026-08-08 12:00:16 | 6 | ||||||||
|
Chinese Academy of Sciences; Beijing; China Resource Report Resource Website 50+ mentions |
Chinese Academy of Sciences; Beijing; China (RRID:SCR_012797) | CAS | university | Public university for graduate education, under the direct leadership of the Chinese Academy of Sciences. |
is parent organization of: pFind Studio: pLink is parent organization of: Cascleave is parent organization of: rSNPBase is parent organization of: pNovo+ is parent organization of: pLabel is parent organization of: pBuild is parent organization of: Human Potential Tumor Associated Antigen database is parent organization of: pFind is parent organization of: Linked Neuron Data is parent organization of: QC-Chain is parent organization of: Network Ontology Analysis is parent organization of: GOEAST - Gene Ontology Enrichment Analysis Software Toolkit is parent organization of: Human Protein-Protein Interaction Mining Tool is parent organization of: Database of Domain Interactions and Bindings is parent organization of: Group Information Guided ICA is parent organization of: Groupwise Image Registration Toolbox is parent organization of: Local Label Learning Segmentation is parent organization of: Shanghai Institutes for Biological Sciences; Shanghai; China is parent organization of: GPU-Meta-Storms is parent organization of: EPGD is parent organization of: MethyCancer is parent organization of: inGAP is parent organization of: SysZNF - C2H2 Zinc Finger genes is parent organization of: NONCODE is parent organization of: Systematic Platform for Identifying Mutated Proteins (SysPIMP) is parent organization of: IVDB - Influenza Virus Database is parent organization of: Brainnetome fMRI toolkit is parent organization of: Brainnetome Atlas Viewer is parent organization of: Automatic Tractography-based Parcellation Pipeline |
grid.9227.e, Wikidata: Q530471, ISNI: 119573309, Crossref funder ID: 501100002367, nlx_47801 | https://ror.org/034t30j35 | SCR_012797 | Chinese Academy of Sciences | 2026-08-08 12:00:03 | 66 | ||||||||
|
U.S. Department of Defense Resource Report Resource Website 50+ mentions |
U.S. Department of Defense (RRID:SCR_012712) | DOD | institution | Executive branch department of the federal government charged with coordinating and supervising all agencies and functions of the government directly related to national security and the United States Armed Forces. | Government granting agency |
is parent organization of: Defense Advanced Research Projects Agency is parent organization of: Office of Naval Research is parent organization of: Defense and Veterans Brain Injury Center is parent organization of: Defense Centers of Excellence for Psychological Health and Traumatic Brain Injury is parent organization of: Congressionally Directed Medical Research Program is parent organization of: BHSAI; Maryland; USA |
ISNI: 0000 0004 0478 6223, grid.420391.d, nlx_143670, Crossref funder ID: 100000005, Wikidata: Q11209 | https://ror.org/0447fe631 | SCR_012712 | Department of Defense, United States Department of Defense, US Department of Defense | 2026-08-08 12:00:16 | 64 | |||||||
|
AngioCalc Cerebral Aneurysm Calculator Resource Report Resource Website 10+ mentions |
AngioCalc Cerebral Aneurysm Calculator (RRID:SCR_012805) | AngioCalc | data management software, software resource, software application | Providing quality resources for the management of cerebral aneurysms and features an online calculator that calculates cerebral aneurysm volume and percent packing volume after coil embolization. The site also host an imaging Library with neuroanatomy and neurovascular images. | is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) | nlx_155693 | SCR_012805 | AngioCalc Cerebral and Peripheral Aneurysm Calculator, AngioCalc Cerebral Aneurysm Calculator | 2026-08-08 12:00:03 | 12 | |||||||||
|
USC Multimodal Connectivity Database Resource Report Resource Website 10+ mentions |
USC Multimodal Connectivity Database (RRID:SCR_012809) | UMCD | data or information resource, database, service resource, storage service resource, data repository | Web-based repository and analysis site for connectivity matrices that have been derived from neuroimaging data including different imaging modalities, subject groups, and studies. Users can analyze connectivity matrices that have been shared publicly and upload their own matrices to share or analyze privately. | fmri, dti, dsi, mri, eeg, meg, data set, image, computational hosting, connectivity, neuroimaging, data sharing, brain, rendering, diffusion-weighted mri, functional connectivity, graph theory, resting-state fmri, structural connectivity, image display, magnetic resonance, python, rendering, visualization, connectivity matrix, network, brain network, matrix, de-identified, male, female, apoe, child, adult |
is used by: NIF Data Federation is listed by: NeuroImaging Tools and Resources Collaboratory (NITRC) has parent organization: MGH-USC Human Connectome Project |
Normal, Lesioned, Attention deficit-hyperactivity disorder, Autism Spectrum Disorder, Obsessive-Compulsive Disorder, BDD, APOE 4/4, APOE 3/4, APOE 3/3, Alzheimer's disease | NRSA ; NIH Blueprint for Neuroscience Research ; NIA F31AG035438-01; NIDA HHSN271200800035C |
PMID:23226127 PMID:20850551 |
The community can contribute to this resource, Some features require an account | nlx_83091 | http://www.nitrc.org/projects/umcd | http://jessebrown.webfactional.com/welcome/default/index | SCR_012809 | UCLA Connectivity Database, UCLA Multimodal Connectivity Database: Web-based brain network analysis and data sharing, UCLA Multimodal Connectivity Database | 2026-08-08 11:59:47 | 26 | ||
|
GNU.org Resource Report Resource Website 100+ mentions |
GNU.org (RRID:SCR_012764) | software resource | Unix-like operating system that is free software. GNU (more precisely, GNU/Linux systems) are entirely free software. The GNU Project was launched in 1984 to develop the GNU system. A Unix-like operating system is a software collection of applications, libraries, and developer tools, plus a program to allocate resources and talk to the hardware, known as a kernel. The Hurd, GNU''s own kernel, is some way from being ready for daily use. Thus, GNU is typically used today with a kernel called Linux. This combination is the GNU/Linux operating system. GNU/Linux is used by millions, though many call it Linux by mistake. | nlx_156924 | SCR_012764 | 2026-08-08 12:00:02 | 178 | ||||||||||||
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CexoR Resource Report Resource Website |
CexoR (RRID:SCR_012769) | CexoR | software resource | Software for strand specific peak-pair calling in ChIP-exo replicates. |
is listed by: OMICtools has parent organization: Bioconductor |
MIT License | OMICS_00519 | SCR_012769 | CexoR: An R package to uncover high-resolution protein-DNA interactions in ChIP-exo replicates | 2026-08-08 12:00:02 | 0 | ||||||||
|
edgeR Resource Report Resource Website 10000+ mentions |
edgeR (RRID:SCR_012802) | edgeR | software resource, software application, data analysis software, data processing software | Bioconductor software package for Empirical analysis of Digital Gene Expression data in R. Used for differential expression analysis of RNA-seq and digital gene expression data with biological replication. | empirical, analysis, digital, gene, expression, data, R, RNA-seq data, bio.tools |
is used by: Glimma is listed by: OMICtools is listed by: Debian is listed by: bio.tools is related to: SARTools is related to: Bioconductor works with: tximport |
NHMRC 406657; Independent Research Institutes Infrastructure Support Scheme 361646; Victorian State Government OIS grant ; Melbourne International Research Scholarship ; Harris and IBS Honours scholarships |
PMID:19910308 DOI:10.1093/bioinformatics/btp616 |
Free, Available for download, Freely available | OMICS_01308, biotools:edger | https://bio.tools/edger, https://sources.debian.org/src/r-bioc-edger/ | SCR_012802 | edgeR, empirical analysis of digital gene expression data in R, Empirical analysis of Digital Gene Expression data in R | 2026-08-08 12:00:03 | 23868 | ||||
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MotifLab Resource Report Resource Website 1+ mentions |
MotifLab (RRID:SCR_012649) | MotifLab | software resource | Software for a general workbench for analyzing regulatory sequence regions and discovering transcription factor binding sites and cis-regulatory modules. |
is listed by: OMICtools has parent organization: Norwegian University of Science and Technology; Trondheim; Norway |
Research Council of Norway | PMID:23323883 | Acknowledgement requested, Free, Public | OMICS_00486 | SCR_012649 | 2026-08-08 12:00:01 | 2 |
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