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| Resource Name | Proper Citation | Abbreviations | Resource Type |
Description |
Keywords | Resource Relationships | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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KB Bio 101 Resource Report Resource Website |
KB Bio 101 (RRID:SCR_010268) | AURA | controlled vocabulary, data or information resource, ontology | Ontology of the AURA + Inquire project at SRI International, Menlo Park. | owl | is listed by: BioPortal | Creative Commons Attribution-NonCommercial-ShareAlike License, v3 | nlx_157455 | SCR_010268 | KB_Bio_101 | 2026-07-28 09:42:44 | 0 | |||||||
|
Current Procedural Terminology Resource Report Resource Website |
Current Procedural Terminology (RRID:SCR_010301) | CPT | controlled vocabulary, data or information resource, ontology | Ontology of current procedural terminology. | umls | is listed by: BioPortal | nlx_157380 | SCR_010301 | 2026-07-28 09:42:45 | 0 | |||||||||
|
Bilingual Ontology of Alzheimer Resource Report Resource Website |
Bilingual Ontology of Alzheimer (RRID:SCR_010149) | ONTOAD | controlled vocabulary, data or information resource, ontology | A bilingual (English-French) domain ontology for modeling knowledge about Alzheimer's Disease and Related Syndromes. | owl, alzheimer, ontology, bilingual | is listed by: BioPortal | Alzheimer's disease, Alzheimer's Related Syndrome | nlx_157325 | SCR_010149 | 2026-07-28 09:42:37 | 0 | ||||||||
|
Dataset processing Resource Report Resource Website |
Dataset processing (RRID:SCR_010303) | ONL-DP | controlled vocabulary, data or information resource, ontology | Ontology that is a module of the OntoNeuroLOG ontology, that covers the domain of Datasets and the processing of datasets developed in the context of the NeuroLOG project, a french project aiming at integrating distributed heterogeous resources in neuroimaging. It includes a detailed taxonomy of datasets in the area of neuroimaging (and especially MR imaging) as well as a taxonomy of medical image processing. | owl neuroimaging, mri | is listed by: BioPortal | French National Research Agency ANR-06-TLOG-024 | nlx_157382 | SCR_010303 | 2026-07-28 09:42:42 | 0 | ||||||||
|
BRENDA Tissue and Enzyme Source Ontology Resource Report Resource Website 1+ mentions |
BRENDA Tissue and Enzyme Source Ontology (RRID:SCR_010031) | BTO | controlled vocabulary, data or information resource, ontology | A structured controlled vocabulary for the source of an enzyme. It comprises terms for tissues, cell lines, cell types and cell cultures from uni- and multicellular organisms. | obo |
is used by: TISSUES is listed by: BioPortal has parent organization: BRENDA |
nlx_157323 | SCR_010031 | 2026-07-28 09:42:36 | 1 | |||||||||
|
Artificial Intelligence Rheumatology Consultant System Ontology Resource Report Resource Website |
Artificial Intelligence Rheumatology Consultant System Ontology (RRID:SCR_010274) | AI-RHEUM | controlled vocabulary, data or information resource, ontology | Ontology used for the diagnosis of rheumatologic diseases. AI/RHEUM contains findings, such as clinical signs, symptoms, laboratory test results, radiologic observations, tissue biopsy results, and intermediate diagnosis hypotheses. Findings and hypotheses, which include definitions, are used to reach diagnostic conclusions with definite, probable, or possible certainty. AI/RHEUM is used by clinicians and informatics researchers. | umls | is listed by: BioPortal | Rheumatologic disease | nlx_157320 | SCR_010274 | 2026-07-28 09:42:42 | 0 | ||||||||
|
Leukocyte Surface Marker Ontology Resource Report Resource Website |
Leukocyte Surface Marker Ontology (RRID:SCR_010275) | LSM | controlled vocabulary, data or information resource, ontology | An ontology of CD markers for lymphocyte classification in the cell ontology, and other categories of surface and secreted proteins useful for discriminating between lymphocyte subsets by flow cytometry, ELISPOT, ELISA and other assays typically used for phenotypic identification of individual lymphocytes or lymphocyte populations have been included. | obo | is listed by: BioPortal | nlx_157457 | SCR_010275 | 2026-07-28 09:42:41 | 0 | |||||||||
|
Fanconi Anemia Ontology Resource Report Resource Website |
Fanconi Anemia Ontology (RRID:SCR_010319) | IFAR | controlled vocabulary, data or information resource, ontology | An application ontology devoted to the standardized recording of data related to Fanconi Anemia (FA). This ontology was created using an OWL file provided by Dr. Ada Hamish (and Francois Schiettecatte) at the Centers for Mendelian Genetics, with their permission. Their original ontology can be found at: http://phenodb.net/help/features. Modifications were made using HPO, OMIM, NCI, and SNOMED. Novel classes pertaining to FA were added and defined as appropriate. | owl | is listed by: BioPortal | Fanconi Anemia | nlx_157403 | http://lab.rockefeller.edu/smogorzewska/ifar/ | SCR_010319 | 2026-07-28 09:42:46 | 0 | |||||||
|
Electrocardiography Ontology Resource Report Resource Website |
Electrocardiography Ontology (RRID:SCR_010313) | ECG | controlled vocabulary, data or information resource, ontology | Ontology for describing electrocardiograms, their capture method(s) and their waveforms. | owl |
is listed by: BioPortal has parent organization: CardioVascular Research Grid (CVRG) |
nlx_157394 | SCR_010313 | ECG Ontology | 2026-07-28 09:42:46 | 0 | ||||||||
|
Cellular microscopy phenotype ontology Resource Report Resource Website |
Cellular microscopy phenotype ontology (RRID:SCR_010282) | CMPO | controlled vocabulary, data or information resource, ontology | A species neutral ontology for describing general phenotypic observations relating to the whole cell, cellular components, cellular processes and cell populations. CMPO is an application ontology developed in OWL that contains precomposed phenotypes descriptions that are defined using the Gene Ontology (GO) and the Phenotype Trait Ontology (PATO). | owl, phenotype | is listed by: BioPortal | nlx_157357 | https://github.com/EBISPOT/CMPO | SCR_010282 | 2026-07-28 09:42:45 | 0 | ||||||||
|
ABA Adult Mouse Brain Ontology Resource Report Resource Website |
ABA Adult Mouse Brain Ontology (RRID:SCR_010286) | ABA-AMB | controlled vocabulary, data or information resource, ontology | Allen Brain Atlas P56 Mouse Ontology | owl |
is listed by: BioPortal has parent organization: Allen Institute for Brain Science |
nlx_157311 | SCR_010286 | Allen Brain Atlas (ABA) Adult Mouse Brain Ontology, Allen Brain Atlas Adult Mouse Brain Ontology | 2026-07-28 09:42:42 | 0 | ||||||||
|
AEO Resource Report Resource Website |
AEO (RRID:SCR_010287) | AEO | controlled vocabulary, data or information resource, ontology | An ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology, to about 200 classes using the is_a relationship; it thus provides a detailed type classification for tissues. The new classes were chosen for their use in categorizing the major vertebrate and invertebrate anatomy ontologies at a granularity adequate for tissues of a single cell type. The ontology should be useful in increasing the amount of knowledge in anatomy ontologies, facilitating annotation and enabling interoperability across anatomy ontologies | obo |
is listed by: BioPortal has parent organization: OBO |
nlx_157312 | http://purl.bioontology.org/ontology/AEO | SCR_010287 | Anatomical Entity Ontology, Ontology of Anatomical Entities - AEO | 2026-07-28 09:42:42 | 0 | |||||||
|
African Traditional Medicine Ontology Resource Report Resource Website |
African Traditional Medicine Ontology (RRID:SCR_010288) | ATMO | controlled vocabulary, data or information resource, ontology | Ontology that describes the actors'' function (healer, fetishist or soothsayer); the different types of proposed process treatment, the symptom''s roles and the disease consideration. | obo | is listed by: BioPortal | nlx_157313 | SCR_010288 | 2026-07-28 09:42:45 | 0 | |||||||||
|
Biomedical Research Integrated Domain Group Model Resource Report Resource Website |
Biomedical Research Integrated Domain Group Model (RRID:SCR_010265) | BRIDG | controlled vocabulary, data or information resource, ontology | An instance of a Domain Analysis Model (DAM) with the goal of producing a shared view of the dynamic and static semantics for the domain of protocol-driven research and its associated regulatory artifacts. This domain of interest is further defined as: Protocol-driven research and its associated regulatory artifacts: i.e. the data, organization, resources, rules, and processes involved in the formal assessment of the utility, impact, or other pharmacological, physiological, or psychological effects of a drug, procedure, process, or device on a human, animal, or other subject or substance plus all associated regulatory artifacts required for or derived from this effort, including data specifically associated with post-marketing adverse event reporting. The Biomedical Research Integrated Domain Group (BRIDG) Model is a collaborative effort engaging stakeholders from the Clinical Data Interchange Standards Consortium (CDISC), the HL7 Regulated Clinical Research Information Management Technical Committee (RCRIM TC), the National Cancer Institute (NCI) and its Cancer Biomedical Informatics Grid (caBIG??), and the US Food and Drug Administration (FDA). Source repository: https://ncisvn.nci.nih.gov/WebSVN/listing.php?repname=bridg-model&path=%2Ftrunk%2FModel+-+OWL%2F& | owl |
is listed by: BioPortal has parent organization: National Cancer Institute |
nlx_157336 | http://www.bridgmodel.org/ | SCR_010265 | BRIDG Model | 2026-07-28 09:42:41 | 0 | |||||||
|
Immune Disorder Ontology Resource Report Resource Website |
Immune Disorder Ontology (RRID:SCR_010344) | IMMDIS | controlled vocabulary, data or information resource, ontology | Ontology generated as part of the Bioinformatics Integration Support Contract (BISC) that is based on the National Library of Medicine (NLM) Medical Subject Headings; National Cancer Institute Thesaurus; International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9-CM); ICD-10; and other open source public databases. Specific information may be available about a class, including Preferred_Name, DEFINITION, Synonym, etc. | obo, health, immunology | is listed by: BioPortal | NIAID ; Division of Allergy Immunology and Transplantation |
nlx_157438 | SCR_010344 | 2026-07-28 09:42:43 | 0 | ||||||||
|
InterNano Nanomanufacturing Taxonomy Resource Report Resource Website 1+ mentions |
InterNano Nanomanufacturing Taxonomy (RRID:SCR_010346) | InterNano | controlled vocabulary, data or information resource, ontology | A custom-built terminology to describe the nanomanufacturing enterprise. | owl | is listed by: BioPortal | NSF CMMI-1025020 | nlx_157442 | SCR_010346 | 2026-07-28 09:42:47 | 1 | ||||||||
|
Interaction Network Ontology Resource Report Resource Website 1+ mentions |
Interaction Network Ontology (RRID:SCR_010347) | INO | controlled vocabulary, data or information resource, ontology | An ontology in the domain of interaction network that aims to standardize interaction network annotation, integrate various interaction network data, and support computer-assisted reasoning. It is aimed to represent general interactions (e.g., molecular interactions) and interaction networks (e.g., Bayesian network). INO was initiated by supporting literature mining related to interactions and interaction networks. INO aligns with BFO. INO is a community-based ontology, and its development follows the OBO Foundry principles. | owl | is listed by: BioPortal | nlx_157443 | SCR_010347 | 2026-07-28 09:42:43 | 2 | |||||||||
|
Clinical Signs and Symptoms Ontology Resource Report Resource Website |
Clinical Signs and Symptoms Ontology (RRID:SCR_007226) | CSSO | controlled vocabulary, data or information resource, ontology | An ontology for describing clinical signs and symptoms. | owl | is listed by: BioPortal | nlx_157365 | http://mdb.bio.titech.ac.jp/csso | SCR_007226 | 2026-07-28 09:41:55 | 0 | ||||||||
|
Skin Physiology Ontology Resource Report Resource Website |
Skin Physiology Ontology (RRID:SCR_006253) | SPO | controlled vocabulary, data or information resource, ontology | THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available. | owl | is listed by: BioPortal | THIS RESOURCE IS NO LONGER IN SERVICE | nlx_157589 | SCR_006253 | 2026-07-28 09:41:30 | 0 | ||||||||
|
Physician Data Query Resource Report Resource Website 1+ mentions |
Physician Data Query (RRID:SCR_006833) | PDQ | people resource, data or information resource, clinical trial, registry, database, ontology, controlled vocabulary | NCI''s comprehensive cancer database that contains summaries on a wide range of cancer topics; a registry of 8,000+ open and 19,000+ closed cancer clinical trials from around the world; a directory of professionals who provide genetics services; the NCI Dictionary of Cancer Terms, with definitions for 6,800+ cancer and medical terms; and the NCI Drug Dictionary, which has information on 2,300+ agents used in the treatment of cancer or cancer-related conditions. The PDQ cancer information summaries are peer reviewed and updated monthly by six editorial boards comprised of specialists in adult treatment, pediatric treatment, supportive care, screening and prevention, genetics, and complementary and alternative medicine. The Boards review current literature from more than 70 biomedical journals, evaluate its relevance, and synthesize it into clear summaries. Many of the summaries are also available in Spanish. | adult, pediatric, child, alternative, breast, clinical trial, colorectal, hypercalcemia, legal, lung, medicine, medullary, nausea, ovarian, pain, pathophysiology, pediatric, pharmaceutical, physician, prevention, prognosis, prostate, psychosocial, query, risk factor, screening, social, syndrome, thyroid, treatment, umls, genetics, medical, drug, peer review |
is listed by: BioPortal has parent organization: National Cancer Institute |
Cancer, Cancer-related condition | NCI | nif-0000-21318 | SCR_006833 | PDQ - NCI''s Comprehensive Cancer Database | 2026-07-28 09:41:38 | 2 |
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