Are you sure you want to leave this community? Leaving the community will revoke any permissions you have been granted in this community.
SciCrunch Registry is a curated repository of scientific resources, with a focus on biomedical resources, including tools, databases, and core facilities - visit SciCrunch to register your resource.
http://purl.bioontology.org/ontology/AURA
Ontology of the AURA + Inquire project at SRI International, Menlo Park.
Proper citation: KB Bio 101 (RRID:SCR_010268) Copy
http://purl.bioontology.org/ontology/CPT
Ontology of current procedural terminology.
Proper citation: Current Procedural Terminology (RRID:SCR_010301) Copy
http://purl.bioontology.org/ontology/ONTOAD
A bilingual (English-French) domain ontology for modeling knowledge about Alzheimer's Disease and Related Syndromes.
Proper citation: Bilingual Ontology of Alzheimer (RRID:SCR_010149) Copy
http://purl.bioontology.org/ontology/ONL-DP
Ontology that is a module of the OntoNeuroLOG ontology, that covers the domain of Datasets and the processing of datasets developed in the context of the NeuroLOG project, a french project aiming at integrating distributed heterogeous resources in neuroimaging. It includes a detailed taxonomy of datasets in the area of neuroimaging (and especially MR imaging) as well as a taxonomy of medical image processing.
Proper citation: Dataset processing (RRID:SCR_010303) Copy
http://purl.bioontology.org/ontology/BTO
A structured controlled vocabulary for the source of an enzyme. It comprises terms for tissues, cell lines, cell types and cell cultures from uni- and multicellular organisms.
Proper citation: BRENDA Tissue and Enzyme Source Ontology (RRID:SCR_010031) Copy
http://purl.bioontology.org/ontology/AI-RHEUM
Ontology used for the diagnosis of rheumatologic diseases. AI/RHEUM contains findings, such as clinical signs, symptoms, laboratory test results, radiologic observations, tissue biopsy results, and intermediate diagnosis hypotheses. Findings and hypotheses, which include definitions, are used to reach diagnostic conclusions with definite, probable, or possible certainty. AI/RHEUM is used by clinicians and informatics researchers.
Proper citation: Artificial Intelligence Rheumatology Consultant System Ontology (RRID:SCR_010274) Copy
http://purl.bioontology.org/ontology/LSM
An ontology of CD markers for lymphocyte classification in the cell ontology, and other categories of surface and secreted proteins useful for discriminating between lymphocyte subsets by flow cytometry, ELISPOT, ELISA and other assays typically used for phenotypic identification of individual lymphocytes or lymphocyte populations have been included.
Proper citation: Leukocyte Surface Marker Ontology (RRID:SCR_010275) Copy
http://purl.bioontology.org/ontology/IFAR
An application ontology devoted to the standardized recording of data related to Fanconi Anemia (FA). This ontology was created using an OWL file provided by Dr. Ada Hamish (and Francois Schiettecatte) at the Centers for Mendelian Genetics, with their permission. Their original ontology can be found at: http://phenodb.net/help/features. Modifications were made using HPO, OMIM, NCI, and SNOMED. Novel classes pertaining to FA were added and defined as appropriate.
Proper citation: Fanconi Anemia Ontology (RRID:SCR_010319) Copy
http://purl.bioontology.org/ontology/ECG
Ontology for describing electrocardiograms, their capture method(s) and their waveforms.
Proper citation: Electrocardiography Ontology (RRID:SCR_010313) Copy
http://purl.bioontology.org/ontology/CMPO
A species neutral ontology for describing general phenotypic observations relating to the whole cell, cellular components, cellular processes and cell populations. CMPO is an application ontology developed in OWL that contains precomposed phenotypes descriptions that are defined using the Gene Ontology (GO) and the Phenotype Trait Ontology (PATO).
Proper citation: Cellular microscopy phenotype ontology (RRID:SCR_010282) Copy
http://purl.bioontology.org/ontology/ABA-AMB
Allen Brain Atlas P56 Mouse Ontology
Proper citation: ABA Adult Mouse Brain Ontology (RRID:SCR_010286) Copy
http://www.obofoundry.org/wiki/index.php/AEO:Main_Page
An ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology, to about 200 classes using the is_a relationship; it thus provides a detailed type classification for tissues. The new classes were chosen for their use in categorizing the major vertebrate and invertebrate anatomy ontologies at a granularity adequate for tissues of a single cell type. The ontology should be useful in increasing the amount of knowledge in anatomy ontologies, facilitating annotation and enabling interoperability across anatomy ontologies
Proper citation: AEO (RRID:SCR_010287) Copy
http://purl.bioontology.org/ontology/ATMO
Ontology that describes the actors'' function (healer, fetishist or soothsayer); the different types of proposed process treatment, the symptom''s roles and the disease consideration.
Proper citation: African Traditional Medicine Ontology (RRID:SCR_010288) Copy
http://purl.bioontology.org/ontology/BRIDG
An instance of a Domain Analysis Model (DAM) with the goal of producing a shared view of the dynamic and static semantics for the domain of protocol-driven research and its associated regulatory artifacts. This domain of interest is further defined as: Protocol-driven research and its associated regulatory artifacts: i.e. the data, organization, resources, rules, and processes involved in the formal assessment of the utility, impact, or other pharmacological, physiological, or psychological effects of a drug, procedure, process, or device on a human, animal, or other subject or substance plus all associated regulatory artifacts required for or derived from this effort, including data specifically associated with post-marketing adverse event reporting. The Biomedical Research Integrated Domain Group (BRIDG) Model is a collaborative effort engaging stakeholders from the Clinical Data Interchange Standards Consortium (CDISC), the HL7 Regulated Clinical Research Information Management Technical Committee (RCRIM TC), the National Cancer Institute (NCI) and its Cancer Biomedical Informatics Grid (caBIG??), and the US Food and Drug Administration (FDA). Source repository: https://ncisvn.nci.nih.gov/WebSVN/listing.php?repname=bridg-model&path=%2Ftrunk%2FModel+-+OWL%2F&
Proper citation: Biomedical Research Integrated Domain Group Model (RRID:SCR_010265) Copy
http://purl.bioontology.org/ontology/IMMDIS
Ontology generated as part of the Bioinformatics Integration Support Contract (BISC) that is based on the National Library of Medicine (NLM) Medical Subject Headings; National Cancer Institute Thesaurus; International Classification of Diseases, Ninth Revision, Clinical Modification (ICD-9-CM); ICD-10; and other open source public databases. Specific information may be available about a class, including Preferred_Name, DEFINITION, Synonym, etc.
Proper citation: Immune Disorder Ontology (RRID:SCR_010344) Copy
http://purl.bioontology.org/ontology/InterNano
A custom-built terminology to describe the nanomanufacturing enterprise.
Proper citation: InterNano Nanomanufacturing Taxonomy (RRID:SCR_010346) Copy
http://purl.bioontology.org/ontology/INO
An ontology in the domain of interaction network that aims to standardize interaction network annotation, integrate various interaction network data, and support computer-assisted reasoning. It is aimed to represent general interactions (e.g., molecular interactions) and interaction networks (e.g., Bayesian network). INO was initiated by supporting literature mining related to interactions and interaction networks. INO aligns with BFO. INO is a community-based ontology, and its development follows the OBO Foundry principles.
Proper citation: Interaction Network Ontology (RRID:SCR_010347) Copy
http://purl.bioontology.org/ontology/CSSO
An ontology for describing clinical signs and symptoms.
Proper citation: Clinical Signs and Symptoms Ontology (RRID:SCR_007226) Copy
http://purl.bioontology.org/ontology/SPO
THIS RESOURCE IS NO LONGER IN SERVICE, documented on April 23, 2014. Description not available.
Proper citation: Skin Physiology Ontology (RRID:SCR_006253) Copy
http://cancer.gov/cancertopics/pdq/cancerdatabase
NCI''s comprehensive cancer database that contains summaries on a wide range of cancer topics; a registry of 8,000+ open and 19,000+ closed cancer clinical trials from around the world; a directory of professionals who provide genetics services; the NCI Dictionary of Cancer Terms, with definitions for 6,800+ cancer and medical terms; and the NCI Drug Dictionary, which has information on 2,300+ agents used in the treatment of cancer or cancer-related conditions. The PDQ cancer information summaries are peer reviewed and updated monthly by six editorial boards comprised of specialists in adult treatment, pediatric treatment, supportive care, screening and prevention, genetics, and complementary and alternative medicine. The Boards review current literature from more than 70 biomedical journals, evaluate its relevance, and synthesize it into clear summaries. Many of the summaries are also available in Spanish.
Proper citation: Physician Data Query (RRID:SCR_006833) Copy
Can't find your Tool?
We recommend that you click next to the search bar to check some helpful tips on searches and refine your search firstly. Alternatively, please register your tool with the SciCrunch Registry by adding a little information to a web form, logging in will enable users to create a provisional RRID, but it not required to submit.
Welcome to the PRECISE-TBI Resources search. From here you can search through a compilation of resources used by PRECISE-TBI and see how data is organized within our community.
You are currently on the Community Resources tab looking through categories and sources that PRECISE-TBI has compiled. You can navigate through those categories from here or change to a different tab to execute your search through. Each tab gives a different perspective on data.
If you have an account on PRECISE-TBI then you can log in from here to get additional features in PRECISE-TBI such as Collections, Saved Searches, and managing Resources.
Here is the search term that is being executed, you can type in anything you want to search for. Some tips to help searching:
You can save any searches you perform for quick access to later from here.
We recognized your search term and included synonyms and inferred terms along side your term to help get the data you are looking for.
If you are logged into PRECISE-TBI you can add data records to your collections to create custom spreadsheets across multiple sources of data.
Here are the sources that were queried against in your search that you can investigate further.
Here are the categories present within PRECISE-TBI that you can filter your data on
Here are the subcategories present within this category that you can filter your data on
If you have any further questions please check out our FAQs Page to ask questions and see our tutorials. Click this button to view this tutorial again.