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Species: Homo sapiens
Genetic Insert: ELK1DM-SIM
Vector Backbone Description: Vector Backbone:Pav103; Vector Types:Yeast Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36108633
Proper citation: RRID:Addgene_190252 Copy
Species: Synthetic
Genetic Insert: jGCaMP7c
Vector Backbone Description: Vector Backbone:pFR; Vector Types:Mammalian Expression, Bacterial Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:41416770
Proper citation: RRID:Addgene_191461 Copy
Genetic Insert: mNeonGreen-PDT
Vector Backbone Description: Vector Backbone:pHN1_lacUV5; Vector Types:Bacterial Expression; Bacterial Resistance:Chloramphenicol
Defining Citation: PMID:34232633
Proper citation: RRID:Addgene_165583 Copy
Species: Synechococcus elongatus PCC 7942
Genetic Insert: CcmO-PDT
Vector Backbone Description: Vector Backbone:pUC57; Vector Types:Bacterial Expression; Bacterial Resistance:Spectinomycin
Defining Citation: PMID:34232633
Proper citation: RRID:Addgene_165584 Copy
Species: Homo sapiens
Genetic Insert: ATP10B
Vector Backbone Description: Backbone Marker:Didier Trono; Backbone Size:10215; Vector Backbone:lentiviral transferplasmid; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Proper citation: RRID:Addgene_191676 Copy
Species: C. intestinalis (ascidian)
Genetic Insert: Brachury notochord enhancer
Vector Backbone Description: Backbone Marker:PMID: 17878951; Backbone Size:2544; Vector Backbone:pDONR-221-P3-P4; Vector Types:Protein expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:17878951
Comments: The Ciona Brachyury enhancer drives expression in the early notochord lineages.
Proper citation: RRID:Addgene_186368 Copy
Species: C. intestinalis (ascidian)
Genetic Insert: Titf endoderm enhancer
Vector Backbone Description: Backbone Marker:PMID: 17878951; Backbone Size:2544; Vector Backbone:pDONR-221-P3-P4; Vector Types:Protein expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:17878951
Comments: The Titf1 cis-regulatory region drives expression in the early gastrula endoderm lineage.
Proper citation: RRID:Addgene_186367 Copy
Species: C. intestinalis (ascidian)
Genetic Insert: Snail regulatory sequence
Vector Backbone Description: Backbone Marker:PMID: 17878951; Backbone Size:2550; Vector Backbone:pDONR-221-P3-P5; Vector Types:Protein expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:17878951
Comments: The Ci-Snail cis-regulatory region drives expression in mesodermal cells.
Proper citation: RRID:Addgene_186365 Copy
Genetic Insert: mNeonGreen
Vector Backbone Description: Vector Backbone:pAM2314; Vector Types:Bacterial Expression; Bacterial Resistance:Chloramphenicol
Defining Citation: PMID:34232633
Proper citation: RRID:Addgene_165582 Copy
Species: Homo sapiens
Genetic Insert: spCas9
Vector Backbone Description: Vector Backbone:pXPR_023 LentiCRISPR v2; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36346242
Comments: Please visit https://www.biorxiv.org/content/10.1101/2022.07.18.500567v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_191550 Copy
Species: E. coli
Genetic Insert: E. coli dihydrofolate reductase
Vector Backbone Description: Backbone Marker:Thermo Fisher; Backbone Size:5483; Vector Backbone:pcDNA DEST40; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36122928
Proper citation: RRID:Addgene_192815 Copy
Species: Synthetic
Genetic Insert: mEGFP
Vector Backbone Description: Backbone Marker:Thermofisher scientific; Backbone Size:5596; Vector Backbone:pcDNA3.1-(-)-Hyg; Vector Types:Mammalian Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:31552049
Comments: Additional References:
Chaumont L, Jouneau L, Huetz F, van Muilekom DR, Peruzzi M, Raffy C, Le Hir J, Minke J, Boudinot P, Collet B. Unexpected regulatory functions of cyprinid Viperin on inflammation and metabolism. BMC Genomics. 2024 Jun 29;25(1):650. doi: 10.1186/s12864-024-10566-x. PMID: 38951796; PMCID: PMC11218377.
Chaumont, L., Peruzzi, M., Huetz, F., Raffy, C., Le Hir, J., Minke, J., Boudinot, P., Collet, B., 2024. Salmonid Double-stranded RNA–Dependent Protein Kinase Activates Apoptosis and Inhibits Protein Synthesis. J. Immunol. https://doi.org/10.4049/JIMMUNOL.2400076 PMID: 39058317
Proper citation: RRID:Addgene_191847 Copy
Species: Homo sapiens
Genetic Insert: Microtubule-associated serine/threonine kinase like
Vector Backbone Description: Backbone Marker:Clontech; Backbone Size:4735; Vector Backbone:pEGFP-C2; Vector Types:Mammalian Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:32311005
Proper citation: RRID:Addgene_191011 Copy
Species: Mus musculus
Genetic Insert: Cdk2ap1
Vector Backbone Description: Backbone Marker:EMD Biosciences; Backbone Size:5369; Vector Backbone:pET28a; Vector Types:Bacterial Expression, Nonviral; Bacterial Resistance:Kanamycin
Defining Citation: PMID:34644528
Proper citation: RRID:Addgene_178033 Copy
Vector Backbone Description: Vector Backbone:pC2YB; Vector Types:Yeast Expression; Bacterial Resistance:Kanamycin
Defining Citation: PMID:28860184
Proper citation: RRID:Addgene_190043 Copy
Species: Virus
Genetic Insert: HPV16-18 E7
Vector Backbone Description: Vector Backbone:MSCV-P C-FlagHA GAW; Vector Types:Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36346242
Comments: CR1-CR2 = 1-42 amino acids of 18E7, C-terminus = 40-98 of 16E7
Please visit https://www.biorxiv.org/content/10.1101/2022.07.18.500567v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_191543 Copy
Species: Caenorhabditis elegans
Genetic Insert: flp-18 CELE_Y48D7A.2
Vector Backbone Description: Vector Backbone:pPD95.62; Vector Types:Worm Expression; Bacterial Resistance:Ampicillin
Defining Citation: PMID:33378642
Proper citation: RRID:Addgene_191023 Copy
Species: Virus
Genetic Insert: HPV16
Vector Backbone Description: Vector Backbone:MSCV-P C-FlagHA GAW; Vector Types:Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36346242
Comments: Please visit https://www.biorxiv.org/content/10.1101/2022.07.18.500567v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_191546 Copy
Species: Virus
Genetic Insert: HPV16
Vector Backbone Description: Vector Backbone:MSCV-P C-FlagHA GAW; Vector Types:Retroviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36346242
Comments: Please visit https://www.biorxiv.org/content/10.1101/2022.07.18.500567v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_191545 Copy
Species: Homo sapiens
Genetic Insert: spCas9
Vector Backbone Description: Vector Backbone:pXPR_023 LentiCRISPR v2; Vector Types:Lentiviral; Bacterial Resistance:Ampicillin
Defining Citation: PMID:36346242
Comments: Please visit https://www.biorxiv.org/content/10.1101/2022.07.18.500567v1 for bioRxiv preprint.
Proper citation: RRID:Addgene_191549 Copy
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