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URL: https://github.com/immunogenomics/starCAT
Proper Citation: starCAT (RRID:SCR_028475)
Description: Software pipeline that improves T cell characterization by simultaneously quantifying predefined gene expression programs (scRNA-Seq) capturing activation states and cellular subsets. Used to score cells based on a fixed, multidataset catalog of Gene Expression Programs from any tissues or cell-type.
Synonyms: starCellAnnoTator, starCellAnnoTator (starCAT)
Resource Type: source code, software toolkit, software resource
Defining Citation: PMID:38746317
Keywords: T cell characterization, simultaneously quantifying predefined gene expression programs, gene expression programs,
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