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URL: https://www.nitrc.org/projects/qcalign
Proper Citation: QCAlign (RRID:SCR_023088)
Description: Software tool to detect regions that are affected by tissue damage, labelling defects, artifacts or errors in image acquisition, regions that are poorly registered, or where registration cannot be verified. Makes it easier for the user to explore the atlas hierarchy and decide on customized hierarchy level for investigation. QCAlign was developed to support QUINT workflow which supports spatial analysis of labelling in series of brain sections from mouse and rat based on registration to reference atlas.
Resource Type: data processing software, image analysis software, software application, software resource
Keywords: QUINT, supports spatial analysis, labelling in series, detect tissue damage regions, detect errors in image acquisitionbrain sections, mouse, rat, reference atlas,
Funding: European Union’s Horizon 2020 Framework Programme for Research and Innovation under the Framework Partnership Agreement No. 650003 (HBP FPA).
Availability: Free, Available for download, Freely available
Resource Name: QCAlign
Resource ID: SCR_023088
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
