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URL: https://pdb-redo.eu/
Proper Citation: PDB-REDO (RRID:SCR_018936)
Description: Web server for macromolecular structure model optimisation and databank of optimised structure models. Focuses on automating final steps of crystallographic process: optimisation of structure model through refinement, rebuilding, and validation. Can automatically optimise most of crystallographic structure models based on input model and diffraction data. Web server works on user provided data, databank has updated versions of Protein Data Bank entries based on original experimental data that were deposited with atomic coordinates in PDB.
Synonyms: PDB_REDO
Resource Type: data access protocol, data processing software, data repository, service resource, software application, software resource, storage service resource, web service
Defining Citation: DOI:10.1107/S2052252514009324
Keywords: Macromolecular structure, model optimization, crystallographic process, final step automating, structure model optimization, structure refinment, structure rebuilding, atomic coordinate, PDB
Funding: Netherlands Organization for Scientific Research
Availability: Free, Freely available
Resource Name: PDB-REDO
Resource ID: SCR_018936
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
