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URL: http://genome.ufl.edu/mapper/mapper-run?init=rs
Proper Citation: rSNPs MAPPER (RRID:SCR_001945)
Description: Data analysis service to identify single nucleotide polymorphisms (SNPs) that may have an effect on the presence of one or more transcription factor binding sites (TFBSs). The input to regulatory SNPs (rSNPs) can consist of one or more genes, a genomic region, or a user-provided sequence. SNPs may be downloaded from dbSNP, entered manually by the user, or obtained by comparing two sequences. The result is a list of TFBSs whose score changes significantly as a consequence of the allele substitution caused by the SNP.
Abbreviations: rSNPs MAPPER
Resource Type: analysis service resource, data analysis service, production service resource, service resource
Defining Citation: PMID:22759655
Keywords: transcription factor binding site, single nucleotide polymorphism, transcription factor, regulatory single nucleotide polymorphism
Availability: THIS RESOURCE IS NO LONGER IN SERVICE
Resource Name: rSNPs MAPPER
Resource ID: SCR_001945
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MAPPER - Multi-genome Analysis of Positions and Patterns of Elements of Regulation |
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
