Proper Citation: CellProfiler Image Analysis Software (RRID:SCR_007358)
Description: Software tool to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically. It counts cells and also measures the size, shape, intensity and texture of every cell (and every labeled subcellular compartment) in every image. It was designed for high throughput screening but can perform automated image analysis for images from time-lapse movies and low-throughput experiments. CellProfiler has an increasing number of algorithms to identify and measure properties of neuronal cell types.
Synonyms: Cell Profiler, CellProfiler - cell image analysis software
Resource Type: data processing software, image analysis software, software application, software resource
Defining Citation: PMID:21349861, PMID:17076895, PMID:19014601, PMID:19188593
Keywords: high-throughput, high content imaging, software, image, cell, phenotype, measurement, subcellular, intensity, size, shape, analysis, algorithm
Funding: NHGRI RL1 HG004671; NIGMS R01 GM089652; NIGMS RC2 GM092519
Availability: Free, Available for download, Freely available
Resource Name: CellProfiler Image Analysis Software
Resource ID: SCR_007358
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Source: SciCrunch Registry (RRID:SCR_005400)
Description: Interactive portal for finding and submitting biomedical resources. Resources within SciCrunch have assigned RRIDs which are used to cite resources in scientific manuscripts. SciCrunch Registry, formerly NIF Registry, provides resources catalog. Allows to add new resources. Allows edit existing resources after registration. Curators are tasked with identifying and registering resources, examining data, writing configuration files to index and display data and keeping contents current.
URL: https://rrid.site/rin/sources/SCR_005400
