Curator Dashboard

AI-powered scanner for H&E- and IHC-stained whole slide images that enables automated quality control workflow by detecting the most common artifacts generated during process of slide preparation and scanning including air bubbles, dust/debris, folds, out-of-focus areas, and pen marks. It is integrated into the HALO AP diagnostic digital pathology platform.

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

Immunohistochemistry stainer is united with software and connectivity options. Can process 48 slides in less than three hours.

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

Reliability and innovation come together in Autostainer Link 48. Our trusted immunohistochemistry stainer is united with revolutionary software and connectivity options, delivering an outstanding level of integration that provides high productivity and efficient workflow.

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

Bench-standing IHC/ISH stainer with three-tray system, with 3.5hour run times. Each tray functions independently, allowing on-demand access and enabling you to load slides as they become available. System accommodates up to 29 antibodies (with detection loaded) and allows for easy swapping of antibodies without interrupting ongoing staining processes.

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

Rapid 15 minute method for the isolation and purification of total RNA (including miRNA) from small input amounts of cultured animal cells, CTC, stem cells, immuno-sorted cells, and microdissected samples including laser-capture microdissection (LCM). The purified RNA is of the highest purity and integrity, and can be used in a number of qRT-PCR and digital PCR and other whole transcriptome applications.

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

Qubit fluorometer designed to accurately measure DNA, RNA, and protein quantity, and now also RNA integrity and quality. Qubit 4 Fluorometer was re-engineered to enable data transfer via WiFi as well as to run Qubit RNA IQ assay. Qubit 4 Fluorometer and RNA IQ Assay Kit work together to accurately distinguish intact from degraded RNA in two steps.

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

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• 1 year ago - submitted by Kyriaki-Barbara Papalois

Database compiles various types of data and information from literature and generalist databases on human TP53 gene variations related to cancer.

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• 1 year ago - by Anonymous

Software R package with various confidence intervals for binomial proportions inside. Confidence intervals are for single, paired and independent proportions. Various confidence interval methods for proportions.

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• 1 year ago - by Anonymous

High-performance computing facility. Its resources have been designed to support labs engaged in genetics and bioinformatics research, but are open to anyone on campus. The Stanford SCG Bioinformatics Cluster is optimized to support large memory, single-node threaded applications as well as applications and workflows that require many small files.

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• 1 year ago - submitted by A. Karl Kornel

Software R package provides two methods of plotting categorical scatter plots such that arrangement of points within category reflects the density of data at that region, and avoids over-plotting. Categorical Scatter (Violin Point) Plots.

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• 1 year ago - by Anonymous

Software R package to convert statistical analysis objects from R into tidy format. Summarizes key information about statistical objects in tidy tibbles. This makes it easy to report results, create plots and consistently work with large numbers of models at once.

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• 1 year ago - by Anonymous

Code to analyse data from "Conserved pan-cancer microenvironment subtypes predict response to immunotherapy" by Bagaev et al.

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• 1 year ago - by Anonymous

Software package contains all original code used to process MxIF data.

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• 1 year ago - by Anonymous

Core provides imaging systems for advanced microscopy including confocal, multi-photon and super-resolution modalities, enabling users to address research questions in living systems across temporal and spatial scales. Staff offers training to use equipment, expertise about experimental strategy, design, image processing and analysis.

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• 1 year ago - by Anonymous