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A biology and bioinformatics laboratory at the Salk containing the following databases: SIGnAL T-DNA Express Arabidopsis Tiling Array Transcriptome Salk Insertion Sequence Database Arabidopsis Gene ORFeome Collection Salk Homozygote T-DNA Collection High Resolution Arabidopsis Methylome Perlegen Arabidopsis Resequencing Arabidopsis GMUCT Uncapped & Cleaved Transcripts Single Feature Polvmorphism Database High Resolution Arabidopsis Exosome Arabidopsis Interactome Single-base Resolution Epigenome Maps Transgenerational Inheritance of Methylation Variants Arabidopsis Cyclome Rice Functional Genomics Database Salk Arabidopsis 1,001 Genomes Arabidopsis Population Epigenomic Diversity Arabidopsis Biotic Stress Epigenome EIN3 -Ethylene Chip-seq/RNA-seq browser Soybean Epigenome Browser Human Human DNA Methylomes Human Pluripotent Cell Methylomes Human/Mouse Brain Methylomes Mouse Circadian Epigenome

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on September 23,2022. Database of approved veterinary drugs run by the FDA.

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• SciCrunch
• 13 years ago - by Anonymous

Database of Orphan Drug Product designations. Searches may be run by entering the product name, orphan designation, and dates. Results can be displayed as a condensed list, detailed list, or an Excel spreadsheet.

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• SciCrunch
• 13 years ago - by Anonymous

Database that contains information about FDA-approved brand name and generic prescription and over-the-counter human drugs and biological therapeutic products. Drugs@FDA includes most of the drug products approved since 1939. The majority of patient information, labels, approval letters, reviews, and other information are available for drug products approved since 1998. Dates of Coverage: 1939-present Update frequency: Daily. Data imported from the Orange Book depends on its update frequency.

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• SciCrunch
• 13 years ago - by Anonymous

A free version of the Unreal Engine 2.0, a powerful and flexible game engine and toolset to create games that run on previous generation hardware configurations and platforms, for non-commercial use. Epic have also released a non-free version of the Runtime that gives licenses access to the native code headers and some limited commercial distribution rights.

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• SciCrunch
• 13 years ago - by Anonymous

European Commission''s primary public repository and portal to disseminate information on all EU-funded research projects and their results in the broadest sense.

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• SciCrunch
• 13 years ago - by Anonymous

Lab portal that contains software including Phred, Phrap, Consed. Our broad research goal is to help provide the computational methods necessary to achieve a complete, quantitative understanding of how cells function at the molecular level. Such an understanding will require three things: a parts list, or catalogue of all cellular molecules; a wiring diagram that specifies the interactions that occur between those molecules; and, finally, quantitative models of systems of interacting molecules. The advent of large-scale genome sequencing is bringing the possibility of completing the parts list within view, although substantial work remains to be done. Most current research in molecular biology is directed at filling the wiring diagram (which may be taken as specifying molecular function). The modeling of molecular systems, still in its infancy, will become increasingly important as the wiring diagram approaches completion and our ability to accurately quantitate cellular molecules improve.

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• SciCrunch
• 13 years ago - by Anonymous

A University of Ghent center of excellence in the fields of gene prediction and genome annotation, comparative and evolutionary genomics, and systems biology. The team is involved in many international genome projects and has a particular interest in genome evolution and gene and genome duplication events.

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• SciCrunch
• 13 years ago - by Anonymous

Whole genome sequencing data for 454 unrelated Scripps Wellderly Study participants with European ancestry from a project that is studying the genetic architecture of exceptional healthspan from a cohort comprised of more than 1300 healthy individuals over the age of 80 years. SWGR_v1.0 includes chromosome-specific VCF4.1 bgzipped and tabix indexed files. Annotations for each variant can be found at Scripps Genome ADVISER (SG-ADVISER, http://genomics.scripps.edu/) Additional data releases are expected.

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• SciCrunch
• 13 years ago - by Anonymous

Nomenclature for innovative activity of biology and anatomo-pathology performed especially in the Centres Hospitalo-Universitaires is usually called activity off nomenclature (BHN for nomenclature and PHN biology for the anatomo-pathology off nomenclature). This character of nomenclature means that health insurance has not yet incorporated these acts in the Nomenclature of acts of biology medical (NABM) or the General Nomenclature of professional acts (NGAP).

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• SciCrunch
• 13 years ago - by Anonymous

Group headed by Professor David Jones, and was originally founded as the Joint Research Council funded Bioinformatics Unit within the Department of Computer Science at University College London. Supports the following tools: Protein Structure Prediction Threading (THREADER) Ab initio folding simulations Secondary structure prediction (PSIPRED) Protein disorder prediction (DISOPRED) Protein domain prediction (DomPred) Database of protein disorder (DisoDB) Protein Sequence Analysis Protein function prediction (ffpred) Metsite: Metal binding residue prediction HSPred : Protein-protein interaction characterisation Amino acid substitution matrices Hidden Markov Models (collaboration with N. Goldman, Cambridge, & J. Thorne, NCSU) Genome Analysis Genomic fold recognition (GenTHREADER) Genome annotation using software agents Protein Structure Classification CATH (collaboration with J. Thornton & C. Orengo, UCL Biochemistry) Transmembrane Protein Modelling MEMSAT & MEMSATSVM Folding In Lipid Membranes (FILM) MEMPACK Biological Applications of Data-mining and Machine Learning Techniques Information extraction for biological research (BioRat) Microarray Analysis Data integration for microarray analysis Data visualization Systems Biology Systems biology applied to stem cells Legacy Services (to be retired shortly) Comparison of structure classifications (CATH/SCOP/FSSP) Genomic Threading Database (GTD)

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• SciCrunch
• 13 years ago - by Anonymous

Johns Hopkins University is private research university in Baltimore, Maryland. Founded in 1876, university was named for its first benefactor, American entrepreneur, abolitionist, and philanthropist Johns Hopkins.

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• SciCrunch
• 16 years ago - submitted by Timothy Tsui

Web tool as secondary structure prediction method, incorporating two feed forward neural networks which perform analysis on output obtained from PSI-BLAST. Web server offering analyses of protein sequences.

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• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented on March 17, 2022. A nucleotide sequence based approach for the unambiguous characterisation of isolates of bacteria and other organisms via the internet. The aim of MLST is to provide a portable, accurate, and highly discriminating typing system that can be used for most bacteria and some other organisms. It is envisaged that this approach will be particularly helpful for the typing of bacterial pathogens. To achieve this aim we have taken the proven concepts of multilocus enzyme electrophoresis (MLEE) and have adapted them so that alleles at each locus are defined directly, by nucleotide sequencing, rather than indirectly from the electrophoretic moblity of their gene products. MLST was developed in the laboratories of Martin Maiden, Dominique Caugant, Ian Feavers, Mark Achtman and Brian Spratt. This site is hosted at Imperial College with funding from the Wellcome Trust. The location of the subsites for the individual species are shown on their respective front pages.

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• SciCrunch
• 13 years ago - by Anonymous

A set of global climate layers (climate grids) with a spatial resolution of about 1 square kilometer. The data can be used for mapping and spatial modeling in a GIS or with other computer programs. If you are not familiar with such programs, you can try DIVA-GIS or the R raster package.

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• SciCrunch
• 13 years ago - by Anonymous

An integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM) from the laboratory of Chih-Chung Chang and Chih-Jen Lin. It supports multi-class classification.

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• SciCrunch
• 13 years ago - by Anonymous

A portable, easy-to-use package for spliced alignment, junction site detection, and reads mapping. The core module was written in C++ and wrapped in PERL scripts.

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• SciCrunch
• 13 years ago - by Anonymous

An organization that acts as adviser and arbiter for the zoological community by generating and disseminating information on the correct use of the scientific names of animals. The ICZN is responsible for producing the International Code of Zoological Nomenclature - a set of rules for the naming of animals and the resolution of nomenclatural problems.

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• SciCrunch
• 13 years ago - by Anonymous

A computational biology laboratory that builds and redistributes genetic software tools.

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• SciCrunch
• 13 years ago - by Anonymous

A classification of health and health-related domains. These domains are classified from body, individual and societal perspectives by means of two lists: a list of body functions and structure, and a list of domains of activity and participation. Since an individual''s functioning and disability occurs in a context, the ICF also includes a list of environmental factors.

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• SciCrunch
• 13 years ago - by Anonymous