Curator Dashboard

A Wiki devoted to topics in clinical informatics. Contents: 1 Health Information Technology Regional Extension Centers 2 Free and Open Source Software (FOSS) licensing in medicine 3 Electronic Healthcare Communication 4 Electronic Medical Record (EMR) Systems 5 Computer-based Provider Order Entry -- CPOE 6 Clinical Decision Support -- CDS 7 Books on Topics in Clinical Informatics 8 Medical Devices, Computerized -- SmartDevices 9 Personal Health Records -- PHRs 10 Personal Health Applications -- PHAs 11 Informatics Students'' Contributions 12 Blueprint for a Comprehensive HIT System 13 Biobanking -- a.k.a. Biorepositories or Tissue Banks 14 Organizational issues 15 Regional Health Information Organizations -- RHIOs 16 Evidence-Based Medicine -- EBM 17 Evaluation Methods in Informatics 18 Unintended Consequences of Health Information Technology 19 Quality & Quality Informatics 20 Public Health Informatics 21 U.S. Federal Health Information Technology Initiatives 22 The E-Patient-Provider Relationship 23 Interface Terminology 24 New CIS-related Technologies 25 Workflow 26 Terminology and Coding 27 Interface/Usability Testing 28 International views 29 Blogposium, April 2006 30 Departments / Schools of Biomedical or Medical Informatics 31 Endowed Professorships and Chairs in Health / Medical / Nursing / Biomedical Informatics 32 Leading Health Informatics and Medical Informatics Journals o 32.1 Ranking of ISI/SCI listed e-Health and Medical Informatics Journals o 32.2 Not listed / ranked in ISI/SCI 33 External Links 34 External Medical Reference Links 35 External Informatics Organizations Links

• Resource
• SciCrunch
• 17 years ago - by Anonymous

Medical technology company that develops and manufactures devices and therapies to treat more than 30 chronic diseases, including heart failure, Parkinson's disease, urinary incontinence, Down syndrome, obesity, chronic pain, spinal disorders, and diabetes. A Commercial healthcare organization for both patients and healthcare professionals. For professionals, it provides products, therapy and procedure solutions, and services.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

The FlyWeb Project is linking research image data from FlyTED with related data from the Berkeley Drosophila Genome Project, FlyBase, FlyAtlas and other sources. This project builds on the findings of the data web requirements analysis project Defining Image Access.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

A contract research service to the pharmaceutical industry, focusing on the use of fresh human tissues to predict drug activity prior to clinical trials. Biopta''s expertise in all areas of human tissue research including sourcing, handling and experimenting on human tissue allows us to act as your Human Tissue Research Department. Biopta has developed an extensive network of tissue collaborators and is accredited as a Research Tissue Bank. It manages procurement, ethics and logistics for human tissue research projects.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE, documented August 22, 2016. An umbilical cord blood bank located in Seoul, South Korea.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

A manually curated database of enzyme-catalyzed and spontaneous chemical reactions. It provides a hierarchical representation of metabolic pathways and a controlled vocabulary for pathway annotation in UniProtKB. UniPathway data are cross-linked to existing metabolic resources such as ChEBI/Rhea, KEGG and MetaCyc. Users may do a quick search, browse pathway, browse compound, or browse organism.

• Resource
• SciCrunch
• 16 years ago - by Anonymous

The web portal provides comprehensive local database of human genome variants with a user-friendly web page that provides a one-stop annotating and funtonal prediction service which is both convenient and up-to-date. A query can be accepted as either a dbSNP Id or a chromosomal location and our system will instantly provide all the annotation information in an interactive LD panel. The system can also simultaneously prioritize this variant based on additive effect mode by corresponding annotation information and evaluate the variant effect that is then displayed in a prioritization tree. Furthermore, cohort sequencing continuously produces lots of un-annotated variants such as rare variants or de novo variants, and our system can even fit this data by accepting genomic coordinates (hg19) to offer maximal annotations. Main Functions Over 40 up-to-date annotation items for human single nucleotide variations; Functional prediction for different types of variants; Dynamic LD panel for both HapMap and 1000 Genomes Project populations; Prioritization score and tree viewer based on variant functional model.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Science in the Open: This blog contains the thoughts of Cameron Neylon on the technical and social issues involved with ''Open Research''. Most people would agree Open Research includes freely accessible literature or perhaps making raw data available. Others might think it also involves people working on collaborative documents such as Wikis or the freedom to re-use the published literature or data. At its logical extreme Open Research includes making all the details of what we do freely available as it happens. Many people find this scarey. Some, perhaps a growing number, find it tremendously exciting.

• Resource
• SciCrunch
• 17 years ago - by Anonymous

bNAber is the Broadly Neutralizing Antibody E-Resource Database, analysis, visualization, and data discovery tool for broadly neutralizing HIV-1 antibodies (bNAbs). bNAber seeks to be a vital tool in the search for an AIDS vaccine.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

EVEX is a text mining resource built on top of PubMed abstracts and PubMed Central full texts. It contains over 40 million bio-molecular events among more than 76 million automatically extracted gene/protein name mentions. The text mining data further has been enriched with gene normalization results, allowing straightforward integration with external resources. Further, gene families from Ensembl and HomoloGene provide homology-based event generalizations. EVEX presents both direct and indirect associations between genes and proteins, enabling explorative browsing of relevant literature.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A consortium of university groups to characterize human immune populations. The Human Immunology Project Consortium (HIPC) program, established in 2010 by the NIAID Division of Allergy, Immunology, and Transplantation, is a major collaborative effort that is generating large amounts of cross-center and cross-assay data including high-dimensional data to characterize the status of the immune system in diverse populations under both normal conditions and in response to stimuli. This large data problem has given birth to ImmuneSpace, a powerful data management and analysis engine where datasets can be easily explored and analyzed using state-of-the-art computational tools.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

An Antibody supplier,

• Resource
• SciCrunch
• 12 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017.<br/><br/>Funding opportunities provided by projects or organizations other than government funding opportunities such as those from NIH or NSF.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A Python library for analysis of mouse behavior. The library can be used for loading and analyzing of data obtained from IntelliCage system in an intuitive way in Python programming language. The library provides users with an object oriented application programming interface (API) and a data abstraction layer. It also comes with auxiliary tools supporting development of analysis workflows. Any published research making use of PyMICE must provide the PyMICE resource identifier (RRID:nlx_158570).

• Resource
• SciCrunch
• 12 years ago - by Anonymous

BrainSlices is a repository of annotated high-resolution images of brain tissue.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

A virtual database cataloging numerous data set resources, including: BrainMaps.org, Cell Centered Database, Clinical Trials Network (CTN) Data Share, ClinicalTrials.gov, CRCNS, Gene Expression Omnibus, ArrayExpress, MPD - Mouse Phenome Database, BioSharing, Gene Weaver, XNAT Central, 1000 Functional Connectomes Project, Health.Data.gov, SciCrunch Registry, NIF Registry Automated Crawl Data, NeuroVault, OpenfMRI, Physiobank, RanchoBiosciences, YPED, Data.gov Science, and Research Data Catalog.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

The project will focus on patients with a rare disease and their families and patients with cancer. The first samples for sequencing are being taken from patients living in England with discussions taking place with Scotland, Wales and Northern Ireland about potential future involvement. Genomics England, a company wholly owned and funded by the Department of Health, was set up to deliver this flagship project which will sequence 100,000 whole genomes from NHS patients by 2017. Its four main aims are; to create an ethical and transparent programme based on consent; to bring benefit to patients and set up a genomic medicine service for the NHS; to enable new scientific discovery and medical insights; and to kick start the development of a UK genomics industry.

• Resource
• SciCrunch
• 12 years ago - by Anonymous

Software toolbox for data processing and analysis of brain imaging, evolved from DPARSF (Data Processing Assistant for Resting-State fMRI).

• Resource
• SciCrunch
• 13 years ago - by Anonymous

A public repository of metabolite information as well as tandem mass spectrometry data is provided to facilitate metabolomics experiments. It contains structures and represents a data management system designed to assist in a broad array of metabolite research and metabolite identification. An annotated list of known metabolites and their mass, chemical formula, and structure are available. Each metabolite is linked to outside resources for further reference and inquiry. MS/MS data is also available on many of the metabolites.

• Resource
• SciCrunch
• 13 years ago - by Anonymous

THIS RESOURCE IS NO LONGER IN SERVICE. Documented September 15, 2017.<br/><br/>A virtual database of annotations between databases.

• Resource
• SciCrunch
• 13 years ago - by Anonymous